Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2867 ATGCTGCCTGATCAAAGAAAAAAGTCCTCTGTGGATGTGAATTTCTTCACAGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCGTTAGATACGCACACTGGAGAAAAGGTTGCAATAAAGAAAATTAATGACATATTTGAACATGTCTCTGATGCCACACGCATTCTTCGTGAGATTAAGCTTCTTAGACTCTTGCGTCACCCTGATATTGTGGAGATCAAACATATCTTGTTACCACCTTCTAGGAGAGAATTTAAAGATATATATGTCGTGTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACTCCAGAGCACTATCAGTTCTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTACATACACACAGCAAATGTTTTTCACCGAGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTTGCCAGAGTAGCATTTAATGATACTCCCACTGCCATATTCTGGACAGATTATGTTGCGACAAGGTGGTATAGGGCTCCTGAGCTGTGTGGATCCTTTTTCTCTAAGTACACGCCAGCTATAGATATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAGTTGGACCTCATGACTGAACTTCTTGGAACACCATCCCCTGAAGCCATTGCTAGGATACGAAATGAGAAAGCTAGGAGATATTTAAGCAGCATGAGAAAGAAGAAGCCAGTTCCTTTCTCCCACAAGTTTCCTAATGCAGATCCGCTTGCTCTTCGTTTGTTGGAAAGAATGTTGGCATTTGACCCTAAGGATCGGCCCAATGCTGAAGAGGCTTTGGCTGACCCATATTTTAAAGGTTTGGCCAAGGTTGAAAGAGAGCCTTCAGCACAGCCAGTTAGCAAGATGGAATTTGAATTCGAGAGACGCAGGATAACAAAGGAGGATATACGAGAGCTCATATATCGAGAAACTCTGGAGTACCATCCAAAGATGTTAAAGGAGTACCTAGAGGGAGCAGAGCCAACAAGTTTTATGTATCCAAGTGCTGTAGACCACTTCAAGAAGCAATTTGCTTATCTCGAGGAGCATTATGGGAAAGGTGGAACTGTTGTGGCTCCTGAGAGGCAGCATGCATCCTTGCCTAGGCCATGTGTATTATATTCAGATAACTCAATACAAAGTCCAGCTGAGGTTGCAGAGGATCTCTCAAAATGTCTCATCAAAGAAGTTGAGAAGCCGCCACCCATAGATAGGACTGGTGGTATCCCTTTGACTCGGCTTCCTCAACAGGTTCCACAAAATATGCAAGGTGCAAGGCCCGGGAAAGTAGTTGGTTCGGTATTGCGTTACAACTGTGGGGTAGCATCAACAGCAGAGGCTTTAGAACAGCGGCAGATGGTTAGAAATCCACCTGTTACGGCCCAATATGCTGCTTCGAGCTGTTCATATCCCAGAAGAAACCCAGGCTGTAAAAATGAGAGGGCAGAAGATGATGGAATAGAAGGTTCTAATGGGTTGCAACCTAAGCCTCAATATATGCCTAGAAAAGTTGCTGCTGCTCAAGGAGGAGCTTCTAGCCATTGGTATTGA 1686 0.433 MLPDQRKKSSVDVNFFTEYGEGSRYRIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTELLGTPSPEAIARIRNEKARRYLSSMRKKKPVPFSHKFPNADPLALRLLERMLAFDPKDRPNAEEALADPYFKGLAKVEREPSAQPVSKMEFEFERRRITKEDIRELIYRETLEYHPKMLKEYLEGAEPTSFMYPSAVDHFKKQFAYLEEHYGKGGTVVAPERQHASLPRPCVLYSDNSIQSPAEVAEDLSKCLIKEVEKPPPIDRTGGIPLTRLPQQVPQNMQGARPGKVVGSVLRYNCGVASTAEALEQRQMVRNPPVTAQYAASSCSYPRRNPGCKNERAEDDGIEGSNGLQPKPQYMPRKVAAAQGGASSHWY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2867 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Mibi01g2867 561 CDD STKc_TDY_MAPK 24 361 - -
Mibi01g2867 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2867 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Mibi01g2867 561 MobiDBLite consensus disorder prediction 515 561 - -
Mibi01g2867 561 FunFam Mitogen-activated protein kinase 111 339 - -
Mibi01g2867 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Mibi01g2867 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Mibi01g2867 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2867 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mibi01g2867 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2867 561 FunFam Mitogen-activated protein kinase 14 119 - -
Mibi01g2867 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2867 Mibi-ChrMibi01 51424377 51429915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2867 1 561 MAP Kinase Gene Family AT5G19010 80.174 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mibi01g2867 Pkinase 9.2e-68 CL0016