Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2865 ATGAGAATTAGGTCCGGCCCAAGATTCATAAAACTTCAAAACCCTAGACGTCACACGCTTTATAGTTCTTCTTCTTTCCTCGAGTTTGTGATCAGCGTCATCTCACTCGCGCGTTTTCAATTCTCTGAGGATTTCCCGTTCCGAATTGTACCAATGGTGAGAGTCAGTGTCTTAAATGATGCTCTGAAGAGTATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTAGGCCATCCTCAAAGGTTGTCATTAAATTTCTTTTGGTGATGCAGAAGCATGGGTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGGCTGGCAAAATTGTTGTTGAATTAAATGGAAGGTTGAACAAATGTGGTGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAGGAGATAGAACCTTGGACTGCAAGGCTACTTCCCTCTAGACAGTTTGGCTATATTGTCTTGACCACCTCCGCTGGTATTATGGATCATGAAGAGGCAAGGAGAAAGAACGTTGGTGGAAAAGTGTTGGGTTTCTTTTACTAG 546 0.4286 MRIRSGPRFIKLQNPRRHTLYSSSSFLEFVISVISLARFQFSEDFPFRIVPMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVVIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2865 181 Pfam Ribosomal protein S8 58 181 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mibi01g2865 181 Gene3D - 121 181 - -
Mibi01g2865 181 FunFam 40S ribosomal protein S15a 121 181 - -
Mibi01g2865 181 SUPERFAMILY Ribosomal protein S8 55 181 IPR035987 GO:0003735|GO:0005840|GO:0006412
Mibi01g2865 181 FunFam 40S ribosomal protein S15a 52 120 - -
Mibi01g2865 181 ProSitePatterns Ribosomal protein S8 signature. 151 168 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mibi01g2865 181 Gene3D - 52 120 - -
Mibi01g2865 181 Hamap 30S ribosomal protein S8 [rpsH]. 53 181 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mibi01g2865 181 PANTHER 40S RIBOSOMAL PROTEIN S15A 52 180 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2865 Mibi-ChrMibi01 51416945 51418892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2865 52 181 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.154 8.88e-92 261