Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2855 ATGGCACTCCTGCAAAATTCACAAGTTGTGTTTCCTAAATGTTTCGCCATTTCAAAATTATCAACTTCCAAGATTCTGTTTCTAAATCTCCCACTGCTTCCAATGCTTACTTCACTCTCAATGTCAATTCCTTCCTCATCACTTACTCTTCGTCGCAACCCCTTTTCATTATTTTGCTGCAGCTGCAGTTTCAGTTCCAATTCTTCTGCGGATTTCAGTATTCCTTCTCCAGCCAAAGTTTTCATTAAAGGGCTTCCTCAGTCAACTTCTGAAGGACGCTTGGTTAAGGCATTTTCAGAGTTTGGTGAAGTTAGTCAAGTCAAGATGCTCATGGACAAAGAATCTGGGCAGTTCGTTGGTATTGCATACATTTGGTTTACCAAGGAAGAGTTTGCACAATTGGCAGTGGAAAAGATGAATGGGAAGTTCTTTGATGGCAGGTTTATTGGTGTTAGAATTCCGAAGAATGGATCATCAAAAAATCAGAGGAACACAGCTCCATACAAGTTTTGA 513 0.4016 MALLQNSQVVFPKCFAISKLSTSKILFLNLPLLPMLTSLSMSIPSSSLTLRRNPFSLFCCSCSFSSNSSADFSIPSPAKVFIKGLPQSTSEGRLVKAFSEFGEVSQVKMLMDKESGQFVGIAYIWFTKEEFAQLAVEKMNGKFFDGRFIGVRIPKNGSSKNQRNTAPYKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2855 170 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
Mibi01g2855 170 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 74 164 - -
Mibi01g2855 170 SUPERFAMILY RNA-binding domain, RBD 68 162 IPR035979 GO:0003676
Mibi01g2855 170 CDD RRM_SF 80 152 - -
Mibi01g2855 170 SMART rrm1_1 79 152 IPR000504 GO:0003723
Mibi01g2855 170 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
Mibi01g2855 170 Gene3D - 62 166 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2855 Mibi-ChrMibi01 51245613 51248022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2855 66 167 Eukaryotic Initiation Factors Gene Family AT1G22760 29.808 1.70e-08 51.2