Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2850 ATGGGAATTTCTTCGAGTAGCGGAAGAAGAACCAATTACTTTCCTAACCCACCACATCTTCCCCCACCACCTTTCTATTTCCCTTCAGAATCTCCTCCTCCTCCTCCGCCGCCACAAGGTTATTATTTCGCCTCACCTTCGCCTTATGCATTGCAAAGCAACAACTTTTTGCCACCCCATGTCTTCTGTTACTCAAATGCATACACCCATTGTTCCAATTATTCCAATTCCATGGTGGTTAGTTTTCCCTACCCACAATCTTTTTTTGTAAATCATGCTAATAATGGGTGGTCCCCATCTTCAATTTACCCTTCTGTTGGTCCTGTTATTTCTCCTCCGCCTTATGTTGATCATCGAACGGCGAAGAAGATTAGGAATGATGTCAATGTGCATAAAGATTCTTTGCGGTTGGAGGTTGATGAGCATTACCCTGATCAGCGCTTGGTTTCGTTCGTTTTTGATGCCTTGCATGATGGGAGCATTACTATAATCTACTTTGCAAAGGAGGAGGAAAAATGTAGGTTTGTACCATTGTTTCCCAATGTATTTGAGCCAATAAGAATCCCTTTTCAGAAAGGAATAGGCCAGAAATTTTGTCAGCCCCCAGGAACAGGCATTGACAAAGGGTTTTTTGAGTTGGATGATCTGTCGAAATGCTCACTTGGAGATGATGTCTTCCCCCTTGTAATATGTGCTGAAACCTGTTTGATAACTTCATCAGCAGATGAAATTCTCGGCAATTCTGTGCTAGATTTTTCTCCTCATATGCAGATTACTCAAGCCATTGTAGAGAAAGGCAATGGTGATGGTCCTTTACAAGTAAAAGTAGACAGGCAGATTCTGTGGATTGATGGGGTCCGCTATGAGTTAAGGGAGTTCTATGGTGTAGGAGGCTCAGCAGCAGCTGATTTTGATGACAACGATTCTGGGAAGGAGTGTGTCATATGCATGACTGAACCAAAGGACACAGCTGTATTACCTTGTCGACACTTGTGCATGTGCAGTGACTGCGCGCAGGCTTTGTGGCTTCAATCAAATAAATGCCCAATATGTCGTCAATCCATTGAGGAACTTATAGAAATTAAGGATAAACAATGATCAGAGGCTGCCAGCTTTTTTGAGCAGGATTCTTTGGTGGACTCAAGGCCTAATCTGAACAGATTGAAGTAA 1170 0.4282 MGISSSSGRRTNYFPNPPHLPPPPFYFPSESPPPPPPPQGYYFASPSPYALQSNNFLPPHVFCYSNAYTHCSNYSNSMVVSFPYPQSFFVNHANNGWSPSSIYPSVGPVISPPPYVDHRTAKKIRNDVNVHKDSLRLEVDEHYPDQRLVSFVFDALHDGSITIIYFAKEEEKCRFVPLFPNVFEPIRIPFQKGIGQKFCQPPGTGIDKGFFELDDLSKCSLGDDVFPLVICAETCLITSSADEILGNSVLDFSPHMQITQAIVEKGNGDGPLQVKVDRQILWIDGVRYELREFYGVGGSAAADFDDNDSGKECVICMTEPKDTAVLPCRHLCMCSDCAQALWLQSNKCPICRQSIEELIEIKDKQXSEAASFFEQDSLVDSRPNLNRLK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2850 389 MobiDBLite consensus disorder prediction 1 40 - -
Mibi01g2850 389 Pfam Zinc finger, C3HC4 type (RING finger) 311 357 - -
Mibi01g2850 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 299 362 IPR013083 -
Mibi01g2850 389 SMART ring_2 313 351 IPR001841 -
Mibi01g2850 389 SUPERFAMILY RING/U-box 307 359 - -
Mibi01g2850 389 ProSiteProfiles Zinc finger RING-type profile. 313 352 IPR001841 -
Mibi01g2850 389 PANTHER MAHOGUNIN 36 369 IPR045194 GO:0061630
Mibi01g2850 389 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 312 352 IPR045195 -
Mibi01g2850 389 FunFam probable E3 ubiquitin-protein ligase LOG2 297 362 - -
Mibi01g2850 389 MobiDBLite consensus disorder prediction 15 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2850 Mibi-ChrMibi01 51163301 51166922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2850 83 368 C3H Transcription Factor Family AT3G06140 55.667 8.67e-103 306