Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2827 ATGCATCCAATAATGGCCTATCCAATCTTGTTGTCCCTCTCATTTGCCATGTTTTCACTTTCTGTAGTTGCTCAAACTAGCAGTAATATCACTCTACGAACTTCCCTTACTGCTGGGGAAAATGACTCTTTCAGGGCTTCACCATCTGGTGAATTTGCGTTTGGGTTCAAAAAAATTGAGGAAGATGGGTTTTTACTAGCAATCTGGTACAACAAAATCCCAGAAGAAACTGTTGTCTGGTCATCCAATGGACAAAATCTTGCAGCCAAGGGTTCTAAAGTTGAGCTCACCTCAAATGGTTCATTCCAACTTGTTGATGCTAATGGTAAGCAGATTTCAGGTGCTACCATTTCAAGAAATGGAGTTGCTTATGCAGCCATGCTTGATTCTGGTAACTTTGTGTTGATTGGAAAAGACTCTCAAACTTTGTGGCAAAGCTTTGATCAACCCACTGACACAATTTTACCAGGACAAATTTTAAATCAAACTGCAAATCTTATTGCACGTTATTCGGAAACTAAATACTCAAGGGGAAAATTCCGGCTTGATCTACAGATGGATGGGAATCTTGTGCTTTACACAACCCGTTTTCCAATGGATGATGCGAATTCTCCTTATTGGGATACTCAAACTTTTGGAAGAGGCTTTTCTTTGGTATTCAATCTATCAGGCTCTGTATTTTTACGTGCAGATAATGGAAGTATAATTGGTACAATATCATCAAGTGCACTATCTACACAAGATTTCTACCAAAGAGCTATTCTTGATTATGATGGAGTCTTTAAGCACTATATCTACCCCAAGAGTAGTAGCACTGGAAGGCGTATGGCCTGGTCAATTCTGTCATTCATTCCTTCAAATATTTGCATAAGTGTTCGTGAAGACAAAGGAAGTGGAGCTTGTGGTTTCAACAGCTATTGTACATTTGACGGGACTAATAAAAGCTGCCACTGTCCAACTGGTTATAGCTTCATTGATCCAAGCGATGTGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTGATCAAACTTCTTTGGAAACAGGCCTCTTTGATTTCAACGAGATGCCCAACACAGATTGGCCATTGTCTGACTATGAAAACGTTCTATCAGTGTCTGAGGATTGGTGCAGACAAGCGTGCTTGGAAGATTGCTTTTGTTCCACTATTATCTTTAGAGATGGAAAATGCTGGAAGAAGAAGCAACCTCTCTCTAATGGAAGAATACATCCTTCTATTGGAGGAAAAGCTTTGATCAAAATAAGGAAGGACAATACTAGTTCGATTCGAGAGGTTATTGATAGAGACAATGATAAATCAAAGTTGATCATCATTGGTTCCACACTTTTGAGCAGTTCTGTTTTCTTAAACTTGGTTTTCTTGGTATTAGCTTGTCTAGTTGCATATCGATGTGGCCACAATAATCCTAAAGTTGATCAAGCTGTCCAATCAACATCAACCATGAACCTAAGAAGTTTCACTTATGAAGAGCTTAGGAAAGGAACAAACGGGTTCACAGAAGAACTCGGTCGTGGTGCATTTTCTATTGTTTACAAAGGTTTTCTACCTGACATACCAGGGAACCTCATTGCCGTGAAAAAATTGAATATGGTGAAAGGAAATGAGAAGGAATTCGAAGCAGAAGTGAGTGCGATTGGTCGAACACATCATAGGAATCTGGTGCAACTGTTGGGATTTTGCAATGAAGGAGAGGATAGGCTACTTGTGTATGAATTCATGAGCATGGGAACTTTAGCTAATTTTATTTTCCAAGATCAAAGGCCAAATTGGTATCAAAGGGTGGAAATTGCAATCGGAACAGCCAAAGGACTTTTATACTTGCATGAAGAATGTGGCACTCAAATTATCCATTGTGATATCAAGCCTCAAAACGTATTGCTTGATGACTCTTACATGGCAAAAATATCAGATTTTGGTTTAGCAAAGCTATTGAAGATTGACCAAACTGTAACTACAACAGCTATTAGAGGAACTAAAGGGTATGTTGCAGCTGAGTGGTTCAAAAACAAGCCAATTACCATGAAGGTTGATGTTTACAGCTTTGGAGTGTTGTTGTTGGAGCTCATTTGTTGCCGAAAGAACTTTGATATGAATGTTAAAGATGAGAATATGATAGTACTAATAGATTGGACATATGATTGCTTTCACCATAAGAGATTGGACATGTTGGTGGAAGATGATAAAGAAGGCCAAATTGACATGAAGAGGGTAGAAGAGTATGTGAAGATAGGCATATGGTGTATTCAAGAGGATCCATCAGCAAGACCCACTATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGAAGTGCCAAATCCCCCTGATCAATCGTCCTTTAATAGTTAA 2376 0.3893 MHPIMAYPILLSLSFAMFSLSVVAQTSSNITLRTSLTAGENDSFRASPSGEFAFGFKKIEEDGFLLAIWYNKIPEETVVWSSNGQNLAAKGSKVELTSNGSFQLVDANGKQISGATISRNGVAYAAMLDSGNFVLIGKDSQTLWQSFDQPTDTILPGQILNQTANLIARYSETKYSRGKFRLDLQMDGNLVLYTTRFPMDDANSPYWDTQTFGRGFSLVFNLSGSVFLRADNGSIIGTISSSALSTQDFYQRAILDYDGVFKHYIYPKSSSTGRRMAWSILSFIPSNICISVREDKGSGACGFNSYCTFDGTNKSCHCPTGYSFIDPSDVMKGCKQDFVSQSCDQTSLETGLFDFNEMPNTDWPLSDYENVLSVSEDWCRQACLEDCFCSTIIFRDGKCWKKKQPLSNGRIHPSIGGKALIKIRKDNTSSIREVIDRDNDKSKLIIIGSTLLSSSVFLNLVFLVLACLVAYRCGHNNPKVDQAVQSTSTMNLRSFTYEELRKGTNGFTEELGRGAFSIVYKGFLPDIPGNLIAVKKLNMVKGNEKEFEAEVSAIGRTHHRNLVQLLGFCNEGEDRLLVYEFMSMGTLANFIFQDQRPNWYQRVEIAIGTAKGLLYLHEECGTQIIHCDIKPQNVLLDDSYMAKISDFGLAKLLKIDQTVTTTAIRGTKGYVAAEWFKNKPITMKVDVYSFGVLLLELICCRKNFDMNVKDENMIVLIDWTYDCFHHKRLDMLVEDDKEGQIDMKRVEEYVKIGIWCIQEDPSARPTMKQVVQMLEGFMEVPNPPDQSSFNS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2827 791 Pfam D-mannose binding lectin 77 161 IPR001480 -
Mibi01g2827 791 Gene3D Transferase(Phosphotransferase) domain 1 582 789 - -
Mibi01g2827 791 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 785 - -
Mibi01g2827 791 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2827 791 Pfam Protein kinase domain 509 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2827 791 CDD PAN_AP_plant 339 423 - -
Mibi01g2827 791 PIRSF SRK 1 791 IPR024171 GO:0004674
Mibi01g2827 791 Gene3D - 20 149 IPR036426 -
Mibi01g2827 791 Gene3D Phosphorylase Kinase; domain 1 470 581 - -
Mibi01g2827 791 Gene3D - 150 272 IPR036426 -
Mibi01g2827 791 SUPERFAMILY Protein kinase-like (PK-like) 481 775 IPR011009 -
Mibi01g2827 791 CDD STKc_IRAK 511 777 - -
Mibi01g2827 791 FunFam Serine/threonine-protein kinase 151 292 - -
Mibi01g2827 791 SMART blect_4 35 150 IPR001480 -
Mibi01g2827 791 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Mibi01g2827 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 782 - -
Mibi01g2827 791 CDD B_lectin 47 150 IPR001480 -
Mibi01g2827 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mibi01g2827 791 ProSitePatterns Protein kinases ATP-binding region signature. 511 536 IPR017441 GO:0005524
Mibi01g2827 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 211 IPR036426 -
Mibi01g2827 791 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2827 791 FunFam S-receptor-like serine/threonine-protein kinase 475 581 - -
Mibi01g2827 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 264 IPR036426 -
Mibi01g2827 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2827 Mibi-ChrMibi01 50704419 50706794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2827 481 776 Receptor kinase-like Gene Family AT1G60800 41.118 1.22e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi01g2827 Pkinase 2.4e-47 CL0016