LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi01g2826	ATGTCCTTTAATATTCATCTAATGGATTTTATGCAGCTATATCCAATCTTGCTATTGTCTCTCCTATTTGCCTCGCTTTCACTTTCTCTAGTTGCTCAAACTTCAACTAACAATTTAATCCCTCCAGGTTCTTCCCTAACAGCTCTGAAAGATGGATCATCCTGGGCTTCACCATCTGGTGAATTTGCATTTGGGTTCAAACAAACAGAGGAAGATGGATTCTTACTAGCCATCTGGTTCAACAAAATACCAGAAAAAACTGTTGTTTGGTGGCCACCGGTCAATAATGGACAAAATCCTCTTGTACCAAAGGGTTCTAAAGTTGAGCTCACTTCGAAAGGTTGGTTCCATCTGATTGATCCCAAAGGTAAGCAAATTTGGAATGCAAATTCTTTAGGAATTGAAGTTGCTCATGCTATCATGCTTGATTCTGGTAACTTAAGGCTAGTTGGTTATGATTCTCTAACTTTATGGCAGAGCTTTGATCAACCCACTGATACAATTTTACCAGGACAAGTTTTAAAACAACCTTCTAAACTTGTTTCACGCTATTTGGAAACTGATTATTCAAGGGGAAGATTTCAATTTAAACTACAGAGTGATGGGAATCTTGTGCTTTACACAACCCATTTTCCAATGGATGATGTGAATTCTCCTTATTGGACTACCCATGTTTTTGTTACTGGATTCTCTTTAACCTTCAACCGATCAGGCTACATAGTTTTACTTGCAGATAATGGAAGTATAATTAGTACAATATCATCAAATCCTCTTGCTTCCATACAAGATTTCTACCAAAGAGCTATTCTCGATTATGATGGAGTCTTTAGGCACTATATCTACCCCAAGAATTATAGCTCTAGCATCAGAAGCTGGTCAACTCTGTCTGTGACGCCTTGGAATATCTGTTTACGTGTTCTTGATGACGAGTCAGGAAGTGGAGCATGTGGTTTCAATAGCTATTGTACATCTGATGGGACCGATAAAAATTGTAACTGTCCATATGGTTATAGTTTTATTGATCCAAGGGATGCGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTGATGAGACTTCTTTGGAAACAGGCCTATTTGAGTTCAACGAGATGCCCAATGCAGATTGGCCATTGTCTGACTATGAACAATTTCAATCGGTGTCAGAGGATTTTTGCAGACAGGCTTGCTTGGAAGATTGCTTTTGTGCCCTTGTTATCTTCAAAGATGGGGAATGCTTGAAGAAGAAGCAACCTCTCTCTAATGGAAGAAAAGATCTTTCTATTGGAGGGAAGGCTTTGATCAAAATAAGAATGGATAATGCTACTTTAAGTCATGATAATGATGATGATATTGATCCAAAGAATAATGGTCAATCGACATTGTTTATCATACGTTCTACAATTTTAAGCATCTCAGTTTTCTTGAACTTATTGTTGTTATTAGGAGCTTGTTTTGTTGCATATCGATTTAGCCACAATAGCTCCGAAGTTCATGAAAACGTCCCATTCATATCAAATATGAATCTTAGAAGTTTCACTTATGAAGAGTTAATGGAAGGAACAAATGGGTTCATAGAAGAATTAGGCCGTGGTGCATTTTCTATTGTTTACAAAGGTTTTCTTCCATACATTCCAGGGAACCTTGTTCCTATTAAAAAGCTCAAAATGGTGGATGAAAGTGACAAGGAATTTGAAGCAGAAGTGAGCGCAATTGGCCAAACACACCATAGGAATCTGGTGAAGCTTCTGGGATTCTGCAATGAAGGAGAGAACAGGCTACTGGTATATGAATTCATGAGCAAGGGAACTTTAGCACGTTTTCTTTTTGAAGACCACAGGCCAAGCTAG	1854	0.3813	MSFNIHLMDFMQLYPILLLSLLFASLSLSLVAQTSTNNLIPPGSSLTALKDGSSWASPSGEFAFGFKQTEEDGFLLAIWFNKIPEKTVVWWPPVNNGQNPLVPKGSKVELTSKGWFHLIDPKGKQIWNANSLGIEVAHAIMLDSGNLRLVGYDSLTLWQSFDQPTDTILPGQVLKQPSKLVSRYLETDYSRGRFQFKLQSDGNLVLYTTHFPMDDVNSPYWTTHVFVTGFSLTFNRSGYIVLLADNGSIISTISSNPLASIQDFYQRAILDYDGVFRHYIYPKNYSSSIRSWSTLSVTPWNICLRVLDDESGSGACGFNSYCTSDGTDKNCNCPYGYSFIDPRDAMKGCKQDFVSQSCDETSLETGLFEFNEMPNADWPLSDYEQFQSVSEDFCRQACLEDCFCALVIFKDGECLKKKQPLSNGRKDLSIGGKALIKIRMDNATLSHDNDDDIDPKNNGQSTLFIIRSTILSISVFLNLLLLLGACFVAYRFSHNSSEVHENVPFISNMNLRSFTYEELMEGTNGFIEELGRGAFSIVYKGFLPYIPGNLVPIKKLKMVDESDKEFEAEVSAIGQTHHRNLVKLLGFCNEGENRLLVYEFMSKGTLARFLFEDHRPS	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi01g2826	617	FunFam	S-receptor-like serine/threonine-protein kinase	493	600	-	-
	Mibi01g2826	617	ProSitePatterns	Protein kinases ATP-binding region signature.	530	554	IPR017441	GO:0005524
	Mibi01g2826	617	CDD	PAN_AP_plant	354	438	-	-
	Mibi01g2826	617	SMART	blect_4	46	164	IPR001480	-
	Mibi01g2826	617	Gene3D	-	34	163	IPR036426	-
	Mibi01g2826	617	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1	33	162	-	-
	Mibi01g2826	617	Pfam	D-mannose binding lectin	87	175	IPR001480	-
	Mibi01g2826	617	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	46	612	-	-
	Mibi01g2826	617	SUPERFAMILY	alpha-D-mannose-specific plant lectins	188	279	IPR036426	-
	Mibi01g2826	617	SUPERFAMILY	alpha-D-mannose-specific plant lectins	74	224	IPR036426	-
	Mibi01g2826	617	Gene3D	Phosphorylase Kinase; domain 1	478	600	-	-
	Mibi01g2826	617	ProSiteProfiles	Bulb-type lectin domain profile.	40	162	IPR001480	-
	Mibi01g2826	617	Pfam	Protein tyrosine and serine/threonine kinase	527	613	IPR001245	GO:0004672\|GO:0006468
	Mibi01g2826	617	Gene3D	-	164	289	IPR036426	-
	Mibi01g2826	617	FunFam	Serine/threonine-protein kinase	165	306	-	-
	Mibi01g2826	617	ProSiteProfiles	Protein kinase domain profile.	524	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi01g2826	617	SUPERFAMILY	Protein kinase-like (PK-like)	502	614	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi01g2826	Mibi-ChrMibi01	50603441	50605294	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi01g2826	511	612	Receptor kinase-like Gene Family	AT1G55610	49.524	2.37e-20	94.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mibi01g2826		PK_Tyr_Ser-Thr	9.3e-13	CL0016