Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2821 ATGATTTTTCATGGTACCTATTTGAATGACAGAGAAGCATTCATAACAAGTATGGACAATCAAAACCACCATGGGCTAGCAGCAGCTGCAGGAGGAATGTCTGGTGCTTCAGCTCAAGCAGCATATGGAATGAATCAATATCAATCAAACCCAATGATGGCTTCTCCTCAGCCTCAGACTCAGCCCCAGTCTCCTTCTCAGGCAGCATCAGGTCTTCATCCATCATCTTCTACCTTCATGAGAGAGCAACAATATGCTCACCAGTACTTGCATCAGGTTCAGCAACAAGAGCTTCGGCAACAACTCCAGAACTTTTGGGCAAACCAATATCATGAAATTGAGCAGGTTGTTGATTTCAAGAACCATAGCCTACCATTAGCTAGGATCAAGAAGATCATGAAAGCTGATGAGGATGTGAGGATGATATCAGCTGAGGCTCCAGTCATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGAGCTAACACTGAGGTCTTGGATCAACGCTGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGACATTGCAGCTGCAATTACAAAGACTGATGTGTTTGATTTTCTGGTTGACATTGTTCCAAGAGATGACTTGAAGGATGAGATGCTTTCATCAGGTGGTATTCCTAGAGTCCCAGCAGCAACATCAGCAGTGGCAGCAGAGAATGTCCCTTACTACTACATGCCACCTCAGCAAGTTGTGGGCCCTCCTCATTCTCCATATGGACCTCCAAAAGTTATCATGGGTAGACCTGTAGGTGATCAAGCTCACTATGGCCAGCCAGGAGGAGCAGCAGGACACCCTTCTTTCTCTGCTCAGATGTGGCCACACCAGCAAAACCCATCCAATAACAATTCAGATTCTTAG 885 0.4588 MIFHGTYLNDREAFITSMDNQNHHGLAAAAGGMSGASAQAAYGMNQYQSNPMMASPQPQTQPQSPSQAASGLHPSSSTFMREQQYAHQYLHQVQQQELRQQLQNFWANQYHEIEQVVDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDEMLSSGGIPRVPAATSAVAAENVPYYYMPPQQVVGPPHSPYGPPKVIMGRPVGDQAHYGQPGGAAGHPSFSAQMWPHQQNPSNNNSDS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2821 294 FunFam Nuclear transcription factor Y subunit gamma 88 201 - -
Mibi01g2821 294 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 123 186 IPR003958 -
Mibi01g2821 294 Gene3D Histone, subunit A 85 201 IPR009072 GO:0046982
Mibi01g2821 294 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 68 223 - -
Mibi01g2821 294 MobiDBLite consensus disorder prediction 278 294 - -
Mibi01g2821 294 MobiDBLite consensus disorder prediction 48 76 - -
Mibi01g2821 294 SUPERFAMILY Histone-fold 54 195 IPR009072 GO:0046982
Mibi01g2821 294 MobiDBLite consensus disorder prediction 254 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2821 Mibi-ChrMibi01 50459042 50459926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2821 35 289 CCAAT-HAP5 Transcription Factor Family AT1G54830 51.737 4.55e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi01g2821 CBFD_NFYB_HMF 6e-17 CL0012