Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2814 ATGGTGGACAGCATTCTCATTCTCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCGTCATCATTTTTGCCTGCAAACCGTGGCGTTTCTTTGTCTCTTCCCGACCCCGCTTATCCACCAAGGATGGTGACATAGAGAGGCCCCTAGTCACAGATGATGCAAACGCTTTACATAACCAGAGCAATGAAATTTCCCGAGACTCTGATCTTGAGGGTGCTTGCCTTTTCAATGAGGGTCTTTTTCGCTCACCACGACCACATGGACTTGTTCATAAGCAAAGGCTTCCTGCTTCGCCTAATGTGCCTCAAGGTGATAGTTCGATTTTAGATGTACCTTCTGATGCTTCAGAAGAAATTGCATTTGGTCAAACTCTTAGGCTTCCCCCAGAACAGTTAGCTGCGATTCAAAAGCATAATAGAGTGAATATTGAAGAGGATAGATTGGAAGATACTGTGCAAAGAGATATCTTAGATCAAAGAAGTTGCCTCACGTTGGAGGTTATCAGCGGTCCTTCTTGTGGAGCTCGTTGTTCTTTACAGTCAGCAAATCCTTCTCATCTACCTCTGACAATTGGAAGAGTTTCTCCAAGTGATTTATTAATAAAGGACTCAGAAGTTTCAGGAAAGCATGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTTGATATGGGTAGCTTGAATGGAACACTCTTGAATTCTCGATCAATCAACCATCCAGATACTAGCAACAGGCTTTGGGGTGAGCCATTTGAGATTGCCAATGGAGATATTATAACTGTTGGAACAACATCAAAAGTCGTTGTCCGTATTTCTTCTCAAGGTGAGCATCAAATTCCATTTGGAGTAGGTATGGTGTCAGATCCCATGGCTTTACGTCGAGGAGGGAAAAAGCTACCTATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGAATATTTGGCATCTGTGATGGGCATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAACTTTTTCCAGAAATAGTTGCTCGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATTACTACATGACGCATCCGACGTTCTTAGAGAGGCATTTTCTCAAACAGAAGCAAGCATGAATCACCATTATGAGGGATGTACAGCAACATTGCTTCTGGTGTGGGTTGATGGTGATGAAAATTTCTATGCACAATGTGCTAATGTTGGAGACTCTTCCTGTGTCATGAGTGTCAATGGGAAACAGATCAATATGACAAAGGATCATAAGATAGCAAATTCTTCTGAAAGACTTCTAATTGAAGAGAGGGGTGAGCCGTTGAAAGATGGGGAAACACGTCTATACGGTATAAATCTTGCAAGGATGCTCGGGGACAAATTTCTCAAACAACAGGATTCCCGGTTTAGTTCAGAGCCTTATATAAGTCAATCAGTGCATATTGATCAAGCAAGCAGGGCTTTTGCCATTCTAGCTAGTGATGGTTTGTGGGATGTTATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGGTGAGAGACAGATACTCCTCACTTGCGGAGAATTCTGCAGAAAAAGTTGCTAATTTCTTGTTGGGTGAGGCTAGAACCCTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATAACTTCGCCAGATATTCTTGTAAATCTGAGTCCTAG 1710 0.4175 MVDSILILFLLLMLLLIIVVIIFACKPWRFFVSSRPRLSTKDGDIERPLVTDDANALHNQSNEISRDSDLEGACLFNEGLFRSPRPHGLVHKQRLPASPNVPQGDSSILDVPSDASEEIAFGQTLRLPPEQLAAIQKHNRVNIEEDRLEDTVQRDILDQRSCLTLEVISGPSCGARCSLQSANPSHLPLTIGRVSPSDLLIKDSEVSGKHALINWNLDKLKWELVDMGSLNGTLLNSRSINHPDTSNRLWGEPFEIANGDIITVGTTSKVVVRISSQGEHQIPFGVGMVSDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGIFGICDGHGGDGAAKSASKLFPEIVARILSDSLKRERVLLLHDASDVLREAFSQTEASMNHHYEGCTATLLLVWVDGDENFYAQCANVGDSSCVMSVNGKQINMTKDHKIANSSERLLIEERGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQSVHIDQASRAFAILASDGLWDVISMKKAIQLVLQVRDRYSSLAENSAEKVANFLLGEARTLRTKDNTSVIFLDFDNFARYSCKSES 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2814 569 SMART PP2C_4 279 555 IPR001932 -
Mibi01g2814 569 FunFam Protein phosphatase 2C 70 158 292 - -
Mibi01g2814 569 ProSitePatterns PPM-type phosphatase domain signature. 322 330 IPR000222 GO:0043169
Mibi01g2814 569 CDD PP2Cc 297 557 IPR001932 -
Mibi01g2814 569 Pfam Protein phosphatase 2C 296 550 IPR001932 -
Mibi01g2814 569 Gene3D - 293 566 IPR036457 -
Mibi01g2814 569 ProSiteProfiles PPM-type phosphatase domain profile. 285 557 IPR001932 -
Mibi01g2814 569 ProSiteProfiles Forkhead-associated (FHA) domain profile. 189 240 IPR000253 GO:0005515
Mibi01g2814 569 SMART FHA_2 188 240 IPR000253 GO:0005515
Mibi01g2814 569 SUPERFAMILY PP2C-like 298 559 IPR036457 -
Mibi01g2814 569 Pfam FHA domain 190 265 IPR000253 GO:0005515
Mibi01g2814 569 SUPERFAMILY SMAD/FHA domain 162 273 IPR008984 GO:0005515
Mibi01g2814 569 CDD FHA 163 276 IPR000253 GO:0005515
Mibi01g2814 569 FunFam Protein phosphatase 2C 70 293 564 - -
Mibi01g2814 569 PANTHER PROTEIN PHOSPHATASE 2C 296 554 IPR015655 GO:0004722|GO:0006470
Mibi01g2814 569 Gene3D - 158 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2814 Mibi-ChrMibi01 50253891 50261978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2814 4 558 PP2C-type Phosphatase Gene Family AT5G19280 57.976 0.0 658