Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2789 ATGACAATCGTTTCATTTTTGACAGAAGAGATGGCGAATCAACTGAAGGAAGATGAGAAAAATGAGCGAATAATTCGAGGTCTTCTCAAACTTCCAGCAAATCGAAGATGTATTAATTGCGACAGTCTGGGGCCACAATATGTATGCACGAATTTCTCGACGTTCGTTTGCACAAACTGTAGTGGGATACACCGGGAATTTACACATCGAGTAAAGTCAATATCTATGTCCAAGTTCACTTCACAAGAAGTTATTGCACTTCAGGAAGGAGGGAATCAGCATGCAAAAGAAGTTTATTTTAAAGATTGGGACTCGAAGAGCCATTCTCTCCCTGATAACAATAATGTTGGCAGGCTCCGCAACTTTATTAAACAAGTTTATGTGGATAAAAGATTCACGGGTGAGAGGACCTATGACAAATCAGAGAGAGTAAATACAGATGACAGGGATCATTTCTCAGAACACTCGAGGGTTCAATCATATCAGGGTGGATCTAAAAGCCCTCCATATGATGACACATATAAACACCGGTATAGTGAGAGCTCTAGTGCTGGTGGAAGAAGTCCTGGGTATGATCAAGAACATGGGCGGTACAGTCATGATAATAGAAGTCCTACTCATCCTCCGGTAATCAGTGATCGGCTTCGAGAAAATAGATTTGCAGATAGGTGGAGGTTTGAAGGTCGTAGAGCATCTGGTGGAGATAATAAGCTGGAAGGCCAATTGCCTGGGCAAGCCAACAACCTGGATTATTCAAGTCCACCAATGGTTCGGTCTTTTAAAGATATTTTGGGAGAAAATGTGGCGCCTCTTCGAATAAGTGAACCCCCTCAAACAAATAGTAAAAAAGCAAATGACGGCCCAGCTCTCGCACAGAGGACTGTATCTTCCAGTAGCATGGCATCCAGCATTAGAAACCCTGCAGAAGTGAAGCTTGAGACTACTAAGAACCTTATTGATTTTGATGCTGAGCCCGTGCCTCCTCTAGCTCAAAACATTACTCACGCCCAACAAACTACTACCCCGCCCATTATGGAACTACCAAATTCCAGCGATGTCAACAATTGGGCCTCTTTTGATGTGTCCCAAGATGCAAAAGCAACTCGAGCTCCTTCAAATGTAAATACACTAGAATCCATGCTTTCCCAATTGTCAGTATCATCATCATTGCCAGCTCATGCTCCTCAAGTCCAACATGGTTCCAGTGTCATTTCTCCTATTCCTGGGAGCACTATGACATTACAAAGAGATGGGAACTTGTTTGTTTCAGCTGCTGGGCCTGCACCAGCACCATCGCTTACTGCGACTGCTGTTGGAGCTATTAACAGCTTTGCGACTTTTCCATCTAGTGGCACTTCAGCATCGCAGAATCCGCAGCCTTTGTCCCCCCCTAATGTTGGTCAGTCTTCGACTCATCCTACACCACCACCAGTAGGAGTGTTGAATAATCAGTCATGGAGTATACATCCAGCACCAACAATTCAAGGTCATCCAAGCATGTCACTGCCACATGTGTCCCATCTTATCTCTAAGCCTGCAACTGAGACTAGCTCCAGTGCGGTTTCAGGACCCTCTGTAGAGGTAAAACCAAGTGGAAGAAAAGAACTTCCTGAGGATCTTTTTACTGTAAAGCATTCTTCCTTCCCTACTGCAGTTCCAGGGTGGCAAATGGTTCCTCCTCATGGCATGGGAATCCCAATTCCATATAATAATATGCCCATGCCAACTCTTCAGCGACCATCAAAATCAACAAATCCATTTGATGTTGGCAGTGAACCACCTCCAGTTCAAACCTCAAATTTTGCTTTGAGATCATCCTTGCCAAGTGGATCAACTTCAGGTTTAATGCTTCCATCAAGCCTAAATAATCCATCGCATGCGTGGAATCCGCCTGGGTACAGATCAGTGTGGCCCCAACAAACACAAACTCATCCATCAGAAATGGCAACGAGGCCTTACATGGGACAAGTGCAGCCAAACATGGCAATGCCATGGCATCAAAATATTGGGAGCTTTGGTGGTGAGGGAGCTGCTATTGGCTTCTCAAACTTAAATCAGCATCTGACTAGTACTAGCACTAGTACATTCTCAGCCCCTTCTTCCTCAAATCTATCGTCTGCAGGACGGAATCCATTTGGATGA 2142 0.4454 MTIVSFLTEEMANQLKEDEKNERIIRGLLKLPANRRCINCDSLGPQYVCTNFSTFVCTNCSGIHREFTHRVKSISMSKFTSQEVIALQEGGNQHAKEVYFKDWDSKSHSLPDNNNVGRLRNFIKQVYVDKRFTGERTYDKSERVNTDDRDHFSEHSRVQSYQGGSKSPPYDDTYKHRYSESSSAGGRSPGYDQEHGRYSHDNRSPTHPPVISDRLRENRFADRWRFEGRRASGGDNKLEGQLPGQANNLDYSSPPMVRSFKDILGENVAPLRISEPPQTNSKKANDGPALAQRTVSSSSMASSIRNPAEVKLETTKNLIDFDAEPVPPLAQNITHAQQTTTPPIMELPNSSDVNNWASFDVSQDAKATRAPSNVNTLESMLSQLSVSSSLPAHAPQVQHGSSVISPIPGSTMTLQRDGNLFVSAAGPAPAPSLTATAVGAINSFATFPSSGTSASQNPQPLSPPNVGQSSTHPTPPPVGVLNNQSWSIHPAPTIQGHPSMSLPHVSHLISKPATETSSSAVSGPSVEVKPSGRKELPEDLFTVKHSSFPTAVPGWQMVPPHGMGIPIPYNNMPMPTLQRPSKSTNPFDVGSEPPPVQTSNFALRSSLPSGSTSGLMLPSSLNNPSHAWNPPGYRSVWPQQTQTHPSEMATRPYMGQVQPNMAMPWHQNIGSFGGEGAAIGFSNLNQHLTSTSTSTFSAPSSSNLSSAGRNPFG 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2789 713 MobiDBLite consensus disorder prediction 449 494 - -
Mibi01g2789 713 Gene3D Arf GTPase activating protein 11 145 IPR038508 -
Mibi01g2789 713 SUPERFAMILY ArfGap/RecO-like zinc finger 21 133 IPR037278 -
Mibi01g2789 713 SMART arf_gap_3 22 140 IPR001164 GO:0005096
Mibi01g2789 713 PRINTS HIV Rev interacting protein signature 34 53 IPR001164 GO:0005096
Mibi01g2789 713 PRINTS HIV Rev interacting protein signature 53 70 IPR001164 GO:0005096
Mibi01g2789 713 PRINTS HIV Rev interacting protein signature 71 92 IPR001164 GO:0005096
Mibi01g2789 713 MobiDBLite consensus disorder prediction 273 308 - -
Mibi01g2789 713 Pfam Putative GTPase activating protein for Arf 23 134 IPR001164 GO:0005096
Mibi01g2789 713 MobiDBLite consensus disorder prediction 573 623 - -
Mibi01g2789 713 MobiDBLite consensus disorder prediction 449 533 - -
Mibi01g2789 713 FunFam Arf-GAP domain and FG repeat-containing protein 1 11 145 - -
Mibi01g2789 713 ProSiteProfiles ARF GTPase-activating proteins domain profile. 22 140 IPR001164 GO:0005096
Mibi01g2789 713 MobiDBLite consensus disorder prediction 272 308 - -
Mibi01g2789 713 MobiDBLite consensus disorder prediction 138 156 - -
Mibi01g2789 713 MobiDBLite consensus disorder prediction 574 623 - -
Mibi01g2789 713 CDD ArfGap_AGFG 22 132 - -
Mibi01g2789 713 MobiDBLite consensus disorder prediction 138 253 - -
Mibi01g2789 713 MobiDBLite consensus disorder prediction 210 234 - -
Mibi01g2789 713 PANTHER ARFGAP/RECO-RELATED 11 713 IPR044820 GO:0005096
Mibi01g2789 713 MobiDBLite consensus disorder prediction 690 713 - -
Mibi01g2789 713 MobiDBLite consensus disorder prediction 510 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2789 Mibi-ChrMibi01 49780177 49785389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2789 22 132 C2H2 Transcription Factor Family AT4G05330 35.345 1.07e-12 68.2