Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2787 ATGAAGAAGAAGGTCTATTCCCCTCTTCTCCTCATCATTACCTTCTTCATCATCTTAGCCTCCACCTCTCTCTCCTCCTCCTCCATTGATGTCCCCATTTCCAGCCATGGATCCCTCACTGACGCCGAAGCCATGTACATCCGGCAACGCCAACTTCTCTACTACAGAGACGAGTATGGCGACAGAGGAGAAGAAGTCACCGTCGATCCTTCTCTTGTCTTCGAGAACAACAGAATTAGAGATGCTTACACAGCCTTGAAAGCTTGGAAGCAAGCCATTCTCTCCGATCCACAGAATTGTACGGCCAATTGGTTTGGCCCTAATGTCTGTAGCTACAGTAACGTTTTCTGTGCTCATGCTTTGGATAACCCTAAGATTCGTACCGTCGCCGGCATTGATCTCAACCACTGCGACATTGCCGGGTACTTGCCTGAAGAGCTCGGACTTCTAACGGATCTCGCTCTCTTCCACATCAACACCAACAGGTTCTGTGGCACTGTTCCTCACAAGTTTGATAGACTTAAGCTTCTGTTTGAACTGGATCTCAGTAACAACAGATTCGCCGGGAAATTTCCCACGGTTGTTCTTCGGCTTCCCAAGCTCAAGTTCTTAGATCTGAGGTTTAATGAATTCGAAGGGACTGTGCCTAGGGAGCTATTTGATAAAGATCTGGACGCGATCTTTATAAACAATAATCGTTTTGTGTTCGATCTTCCTGATAATTTTGGGAACTCTCCGGTGTCGGTTATTGTCGTCGCAAACAACAAGTTCCATGGATGTCTACCGGCGAGCTTGACCAACATGACGAACTTGAACGAGATTATTCTGTTGAATAATGCGCTCCGTTCATGCTTGCCTTCACAGATTGGGCTTCTGAAGAACTTGACGGTGTTCGATGTGAGCTTTAACCAGCTGTTAGGTCCGTTACCGGACAGCATTGGAGGAATGGTGAGTCTTGAACAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAGATCCCTGGGAGTATCTGTATGCTGCCCAATTTACAGAACTTCACATATTCTTATAACTTCTTCACCGGTGAGCCTCCGTCGTGCCTGAATTTGCCGGCGTTTGATGATCGGAGGAATTGTTTACCGGCTAGGCCGTTACAGAGATCGGCGGCACAATGTAAGGCTTTCTTATCAAGGCCTGTGGACTGTAATTCATTCAAATGTAAGCCATTTGTTCCATCACTTCCTCCACCTCCTCAACCTTCGCCTCCAATTCCGGTGCCGTCACCGCCTCCGCCTCCGGTTTTCATCCCGAGCTCTCCGCCTCCGCCTTCGCCGCCACCTCCGGTTTATTCACCGCCTCCACCCCCTCCGTCTCCTCCGCCACCGCCTCCACCGGTTTACTCTCCACCTCCTCCCCCACCGTCTCCTCCGCCGCCTTCACCCCCTCCGCCAGTCTATTCTCCGCCACCACCGCCACCGTCACCTCCACCTCCTTCACCACCGCCACCTGTCTATTCATCACCACCACCACCTTCGCCACCTCCTCCTTCGCCATCGCCGCCTCCACCGTATTGTGTCCGGTCTCCGCCGCCACCGCCACCAAATTCACCCCCACCACCACCGCCAAATTCACCACCACCTCCTGTATTTTATCCACCACCGGTTTACAGCTCACCTCCACCGCCTCATCACAATCCTCCACCGCCACCTCACTCTCCACCACCGCCGCCACCTCACTCGCCTCTGCCGCCAATTTATCCGTATTTATCGCCCCCGCCGCCGCCTCCAGTCCATTCTCCTCCTCCACCTGTCCACTCACCACCACCACCATCTCCCCCACCACCTTGTATAGAACCACCACGACCACCTCCGCCACCATGTGAAGAGCATCCTCCACCACCACCACCTTCTCCCACACCATACTTACCACCTCCATCCCCATCTCCACCTCCACCACCAGCTCCCGTTCACTACAGTTCTCCGCCGCCGCCGCCACCGGTTCAGTATAGTTCCCCGCCGCCTCCTCCGGCGGAAGTTCATTACAGTTCTCCGCCTCCTCCGCCGCCGGTGTACAATTCTCCTCCGCCGCCATCACCGCCGCCTTGTGAAGAAGCTCCACCGCCACCACCAACTCCACCAGTTTCATATGGAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTATGGAGTCTCTTATGCTTCTCCACCTCCACCACCCTTCTATTGA 2220 0.5347 MKKKVYSPLLLIITFFIILASTSLSSSSIDVPISSHGSLTDAEAMYIRQRQLLYYRDEYGDRGEEVTVDPSLVFENNRIRDAYTALKAWKQAILSDPQNCTANWFGPNVCSYSNVFCAHALDNPKIRTVAGIDLNHCDIAGYLPEELGLLTDLALFHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPKLKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLTNMTNLNEIILLNNALRSCLPSQIGLLKNLTVFDVSFNQLLGPLPDSIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLNLPAFDDRRNCLPARPLQRSAAQCKAFLSRPVDCNSFKCKPFVPSLPPPPQPSPPIPVPSPPPPPVFIPSSPPPPSPPPPVYSPPPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPVYSSPPPPSPPPPSPSPPPPYCVRSPPPPPPNSPPPPPPNSPPPPVFYPPPVYSSPPPPHHNPPPPPHSPPPPPPHSPLPPIYPYLSPPPPPPVHSPPPPVHSPPPPSPPPPCIEPPRPPPPPCEEHPPPPPPSPTPYLPPPSPSPPPPPAPVHYSSPPPPPPVQYSSPPPPPAEVHYSSPPPPPPVYNSPPPPSPPPCEEAPPPPPTPPVSYGNPPPAPVYEGPLPPVYGVSYASPPPPPFY 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2787 739 Gene3D Ribonuclease Inhibitor 243 375 IPR032675 -
Mibi01g2787 739 PRINTS Proline rich extensin signature 403 415 - -
Mibi01g2787 739 PRINTS Proline rich extensin signature 418 434 - -
Mibi01g2787 739 PRINTS Proline rich extensin signature 438 450 - -
Mibi01g2787 739 PRINTS Proline rich extensin signature 451 472 - -
Mibi01g2787 739 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 536 - -
Mibi01g2787 739 SUPERFAMILY L domain-like 83 365 - -
Mibi01g2787 739 MobiDBLite consensus disorder prediction 430 726 - -
Mibi01g2787 739 FunFam Leucine-rich repeat extensin-like protein 5 245 384 - -
Mibi01g2787 739 Gene3D Ribonuclease Inhibitor 82 242 IPR032675 -
Mibi01g2787 739 FunFam Leucine-rich repeat extensin-like protein 1 83 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2787 Mibi-ChrMibi01 49753345 49755564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2787 31 504 Leucine-rich Repeat extension Gene Families AT3G24480 70.146 0.0 619
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2787 01 49753345 49755564 Mibi01g2787 01 49753345 49755564 ECH