Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2781 ATGGACAATATTGTGGAAGATGATGCAACGTACCCTCGAAAACCGTACGTTTCTTCGAATCGCCCTAGCTATTCCCATCGCCAAGAACATTTGGTTCGCGCCGCCCCGTATCATCATCATCGCCCAGTGATCAGTCGATACGATGAGGATGGCGAAGATGAAGAAATGGATGAATATGTTGTAGGGAATGACATGGAGGATGACGAAGATGTTGATGGTGAGAATGGTTATGGAACTATGAATATTGATAGCGAAGATGAGTTTGAGAGAAACCCTAAGAAAAGGAAATTGCGGAATCTAACACATGGGAATCGAAGCCCAATAGATGAATGGACTGAGCATGCGACGTTTGTTCTGCTTGAGGTTTGGGGGGACAAGTTTCTTCAACTTGGGAGGAAGAGTTTAAGGTCTGAGGATTGGAATGACGTGGCAGAGAAGTTTTCGGAGGAGATGAAGATGGAGAGGACTGTGGCACAGTGTAGGAGCATGTTGGACAAATTGAAAAGAAGGTATAAGAAAGAGAAAGCGAAGATTGATGAGATGGGGTTGAATTCTAGTAAATGGGCTTATTATAAGAAGATGGATATGTTAATGGCTTCATCAGTGAGGCAAGAATATGGACTTTCATGTGGAATGGATTCTGGGGAGTATGTTTTTATGAATACAAGGGTTTATTTAGATAGATCGAATGGGTTGGATGAGATGAGAGATAGTCCTGGGGAGTCAGAGACGTCTGAAGATGATTCGGATGGGCTTCCACCAAGGAGGGCTAAGATGGTAGATAATGGTGATGGGGAAGAGTCTTTTAGGGAATTGGCGGATTCCATTCAGAAGTTTGGTAAAATATATGAGAAAATTGAGAATCGTAAGAGGCGGCAGATGATGGAGTTGGAGAAGATGAGATTGGATTTTAATAGGGAGTTAGAGCTGCAAAAGAAGCAGATTTTGGAAAGAGCTCAGGCTGAAATTGCAAACTTGCAAGAAGGAGATGAGGATGATGATTCCGACACATCTACAGAGAATGCCAGTGAATGA 1035 0.429 MDNIVEDDATYPRKPYVSSNRPSYSHRQEHLVRAAPYHHHRPVISRYDEDGEDEEMDEYVVGNDMEDDEDVDGENGYGTMNIDSEDEFERNPKKRKLRNLTHGNRSPIDEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWNDVAEKFSEEMKMERTVAQCRSMLDKLKRRYKKEKAKIDEMGLNSSKWAYYKKMDMLMASSVRQEYGLSCGMDSGEYVFMNTRVYLDRSNGLDEMRDSPGESETSEDDSDGLPPRRAKMVDNGDGEESFRELADSIQKFGKIYEKIENRKRRQMMELEKMRLDFNRELELQKKQILERAQAEIANLQEGDEDDDSDTSTENASE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2781 344 Gene3D - 111 173 - -
Mibi01g2781 344 Coils Coil 283 325 - -
Mibi01g2781 344 MobiDBLite consensus disorder prediction 322 344 - -
Mibi01g2781 344 MobiDBLite consensus disorder prediction 230 267 - -
Mibi01g2781 344 Coils Coil 157 184 - -
Mibi01g2781 344 MobiDBLite consensus disorder prediction 1 27 - -
Mibi01g2781 344 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 90 330 IPR044823 -
Mibi01g2781 344 MobiDBLite consensus disorder prediction 326 344 - -
Mibi01g2781 344 MobiDBLite consensus disorder prediction 248 267 - -
Mibi01g2781 344 Pfam Myb/SANT-like DNA-binding domain 109 196 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2781 Mibi-ChrMibi01 49564971 49566005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2781 109 331 Trihelix Transcription Factor Family AT1G54060 32.210 5.94e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi01g2781 Myb_DNA-bind_4 5.1e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2781 01 49564971 49566005 Mibi01g2781 01 49564971 49566005 ECH