Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2760 ATGAATGCCACCTTCTTTAATGGGATGGAGCAGAACGACATGATTCCTCCGTTTGTTGTTAAGACTTTCCATATGGTTAGCGATCCAAATACAGATTCTCTTATAACTTGGGGCAGAGCCAACAATAGCTTCATCGTCATCGATCCTCTGGATTTCTCTCGGATCATCCTCCCTGTTTATTTCAAGCACAACAATTTCTCCAGCTTCGTTCGTCAGCTAAACACATATGGGTTTAGAAAGGTGGATCCGGATCGATGGGAATTCGCGAACGAGTGGTTCCTACGAGGGCAGAAGCATTTGTTGAAGAATATTGTGAGGAGGAAACAGAGTAGGAGCAGTTCTTTGTTGTTTCAGGGGAGGAATTATAATGAAGAGGTGGAAGACGAAGAGTTGATGATGGAGATAGCGAGGTTGAAGGAAGAGCAGAAATCATTAGACGAAGAGCTTCAAGGTATGAACAAGAGATTGGAGACAACGGAAAAACGACCCCAACAAATGATGGCGTTTCTCTGCAAAGTCGTTGAAGATCCAGACTTGCTTTCTCGAATTTTGCTGGAGAAAGAGCAGAAGCAATTAGGGGAGAAGAAACGCCGGCTGATATCGTCGCCGTCGCCGTCGTCTTCTTCCGGCGCGGAGGCGGCGAAGGGGGCGGTGAAGACGGAGGTTGAGGAAGATGAAGCTGCTCCAGAATATGCCATTTTATCTTCGCCGTCGCCGGAAACGACTACCGGTTTTGACTTTGGCGGTTATTACCGGTCGTCGCCGGCGGAGGAGGCGGTGATATCCGGCGCCGGTTATTATAATTATTGCAACGGCGGGTTGCCTGTGACGGCGGTTTCGGCGGGGAGGATGGAGGGTAGGGCGGCGCGTGAGGGAGAGAGGAATATAGCGAGGGAAGGGCAAATGAGGTATTTCACAGAAATGGCGGCGGAGGACAGTCCACGGCCACCTTATCCATTTTCTCTGTTGGAAGGTGGCTTTTAG 984 0.4959 MNATFFNGMEQNDMIPPFVVKTFHMVSDPNTDSLITWGRANNSFIVIDPLDFSRIILPVYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRRKQSRSSSLLFQGRNYNEEVEDEELMMEIARLKEEQKSLDEELQGMNKRLETTEKRPQQMMAFLCKVVEDPDLLSRILLEKEQKQLGEKKRRLISSPSPSSSSGAEAAKGAVKTEVEEDEAAPEYAILSSPSPETTTGFDFGGYYRSSPAEEAVISGAGYYNYCNGGLPVTAVSAGRMEGRAAREGERNIAREGQMRYFTEMAAEDSPRPPYPFSLLEGGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2760 327 Gene3D - 10 108 IPR036388 -
Mibi01g2760 327 SUPERFAMILY "Winged helix" DNA-binding domain 15 107 IPR036390 -
Mibi01g2760 327 FunFam Heat stress transcription factor B-4 10 108 - -
Mibi01g2760 327 Coils Coil 128 162 - -
Mibi01g2760 327 Pfam HSF-type DNA-binding 18 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g2760 327 MobiDBLite consensus disorder prediction 194 225 - -
Mibi01g2760 327 SMART hsfneu3 14 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g2760 327 ProSitePatterns HSF-type DNA-binding domain signature. 57 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g2760 327 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 212 IPR027725 -
Mibi01g2760 327 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g2760 327 PRINTS Heat shock factor (HSF) domain signature 18 41 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g2760 327 PRINTS Heat shock factor (HSF) domain signature 56 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2760 Mibi-ChrMibi01 49225575 49226985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2760 14 207 HSF AT3G24520 65.152 9.11e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi01g2760 HSF_DNA-bind 4e-30 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2760 01 49225575 49226985 Mibi01g2760 01 49225575 49226985 ECH