Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2747 ATGTCAGCATCTCCGTCTCCCGGAGCCGCCCCTGCACCCACATCGCCGCCGTCTCCACCGGCCAACACCACCTCCCCTCCTCCCTCCACCCCATCCTCCCCTCCGCCAGCCACACCCTCTGCTCCGCCCCCAGCCACACCCTCATCACCTCCTCCAGCCACACCCTCATCACCTCCCCCAGCCACACCTTCCATATCCCCTCCCTCCCCTTCCCCTCCTTCTTCCTCAACCTCCCCCTCTCCCCAATCTTCCCCATCTCCCCCTCCTCCCCCTTCCACCCCCAACACCCCACCCAGCCCCCCCAGTCGCACCTCTCCTCCTCCTCCGTCTTCGGGATCCAATTCCCCTTCCACTCCGACTCGCACCTCCCCCCCGCCGCCACCTTCGTCGTCCAAATCCTCGCCGTCTCCGCCTTCCTCGTCGTCGTCGTCGTCGAGTAATAGTTTGTCGTCTGGGGTTATTGTGGCCATTGCCGTTGGGGCTGTTGCTGTTCTTCTTGTCTTGAGTATTTTCTGCCTCTGCTGTCGCAAGAAAAAGAGGAGAAGACGTGATGACGAATACTACATGCCCCCGCCGCCCCCGCCCCCGGTCTTCCCTCAGGGACCTAAAGTTGATCCATATGGTGGCCCGCAGCGTCAGTGGCAACACAATGCTCCTCCTCCTTCAGATCATATGGTCTCAGTAATGCCTAAGCCATCGCCCCCACCACCACCACCACCAGCAGTTGCATCACGTCCTGCCCACACGCCGGTTTATGCTCAACCTCCACCGCCACCTAATTTCATTAGCAGCAGTGGCGGGTCTGGCTCTAACTATTCAGGCGGCGAAAACATTCTTCCACCTCCCTCTCCAAGCTTTGCACTGGGTTTTGCAAAGAGTACATTTACTTATGAGGAGTTGTCCCGGGCAACGGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGCATTCTTCCCAATGGAAAGGAAGTGGCTGTGAAACAGCTTAAGGCTGGTAGTGGGCAGGGTGAGCGCGAGTTTCAAGCTGAAGTCGAGATCATTAGTCGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCATTACTGGCACTCAGAGGTTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAGTTTCACTTGCATGGAAAAGGGAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCTGCAAAAGGATTGGCATACCTTCATGAGGACTGTCATCCTAAGATCATCCACCGTGATATCAAAGCTGCTAACATACTCCTAGATTTTAAGTTTGAAGCAAAGGTGGCGGATTTTGGACTTGCAAAGTTTACATCTGATGTTAATACCCACGTTTCCACTCGAGTGATGGGGACATTTGGTTACCTGGCTCCGGAATATGCTTCTAGTGGGAAACTCACTGACAAATCAGATGTTTTTTCTTTTGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTTGATTCAAGTCATACATTTATGGAGGATAGTTTGGTTGACTGGGCAAGGCCTACGCTCACTCGTGCATTGGAAGATGAAAATTTTGATTCCGTGGTTGATCCAAGACTCCAGCATGAATATGACCCCAACGAGATGGCTCGTATGGTGGCATGTGCTGCAGCTTGCATACGACATTCAGCAAAACGCAGGCCAAGGATGAGCCAGGTTGTTCGTGCTCTAGAAGGAGACGTGTCTTTAGCAGACCTTAATGAAGGAATTAAGCCTGGCCATAGCTCCGTCTACAGCTCTCATGGAAGTTCAGATTATGACACAGTTCAATACAAGGAGGACATGAAGAAGTTCAGGAAAATGGCATTTGGAGGAGGAACCAACGATTATGGTGCAAGTAGTGAATACAGTGGACCGCCTACAAGCGAATATGGCTTGTACCCTTCTGGCTCAAGCAGCGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAGTTCATAA 2049 0.5207 MSASPSPGAAPAPTSPPSPPANTTSPPPSTPSSPPPATPSAPPPATPSSPPPATPSSPPPATPSISPPSPSPPSSSTSPSPQSSPSPPPPPSTPNTPPSPPSRTSPPPPSSGSNSPSTPTRTSPPPPPSSSKSSPSPPSSSSSSSSNSLSSGVIVAIAVGAVAVLLVLSIFCLCCRKKKRRRRDDEYYMPPPPPPPVFPQGPKVDPYGGPQRQWQHNAPPPSDHMVSVMPKPSPPPPPPPAVASRPAHTPVYAQPPPPPNFISSSGGSGSNYSGGENILPPPSPSFALGFAKSTFTYEELSRATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHTFMEDSLVDWARPTLTRALEDENFDSVVDPRLQHEYDPNEMARMVACAAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTVQYKEDMKKFRKMAFGGGTNDYGASSEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMKNSQGFSGSS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2747 682 SMART serkin_6 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2747 682 CDD STKc_IRAK 313 582 - -
Mibi01g2747 682 MobiDBLite consensus disorder prediction 225 262 - -
Mibi01g2747 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mibi01g2747 682 Gene3D Phosphorylase Kinase; domain 1 285 382 - -
Mibi01g2747 682 Gene3D Transferase(Phosphotransferase) domain 1 383 590 - -
Mibi01g2747 682 MobiDBLite consensus disorder prediction 263 278 - -
Mibi01g2747 682 Pfam Protein tyrosine and serine/threonine kinase 312 580 IPR001245 GO:0004672|GO:0006468
Mibi01g2747 682 MobiDBLite consensus disorder prediction 634 662 - -
Mibi01g2747 682 MobiDBLite consensus disorder prediction 634 682 - -
Mibi01g2747 682 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Mibi01g2747 682 MobiDBLite consensus disorder prediction 1 149 - -
Mibi01g2747 682 PRINTS Proline rich extensin signature 19 35 - -
Mibi01g2747 682 PRINTS Proline rich extensin signature 5 17 - -
Mibi01g2747 682 PRINTS Proline rich extensin signature 52 73 - -
Mibi01g2747 682 PRINTS Proline rich extensin signature 40 52 - -
Mibi01g2747 682 ProSiteProfiles Protein kinase domain profile. 307 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2747 682 MobiDBLite consensus disorder prediction 9 134 - -
Mibi01g2747 682 MobiDBLite consensus disorder prediction 189 203 - -
Mibi01g2747 682 FunFam Proline-rich receptor-like protein kinase PERK1 383 591 - -
Mibi01g2747 682 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 160 648 - -
Mibi01g2747 682 MobiDBLite consensus disorder prediction 181 279 - -
Mibi01g2747 682 FunFam proline-rich receptor-like protein kinase PERK1 285 382 - -
Mibi01g2747 682 MobiDBLite consensus disorder prediction 135 149 - -
Mibi01g2747 682 SUPERFAMILY Protein kinase-like (PK-like) 284 580 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2747 Mibi-ChrMibi01 48828331 48831760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2747 107 665 Trihelix Transcription Factor Family AT1G70460 49.643 3.07e-171 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi01g2747 PK_Tyr_Ser-Thr 1.5e-47 CL0016