Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2735 ATGGGAGAAGGTGAGGGGGGAGATTTCCCTCCGAAGAATGTGTCATCGGATTCTTTGCCTTCGGATTTTCCGGCGAAGAAGCTGGCCAGGCAGCTCGATTTCACCGGTTATAGCGGCGGCGCCGCCGTGCCGGGAAACTCGATTCCTCAGCCGCAGGCGGTCACGCCGCCGCCGCGACCGGTTATAACGCAACCGGTTGTTGTGACGCCTATGCCACTGCAGGCTCCTCATTCTTCAGCGAGGGTTGGGAAACCAGAATCCCCAAAATCAAGATCAAGACCAAACTTTGATATGAAGGATGTTACTCCAAAGAAGCAGAAGCAGTGTAATTGTAAACACTCAAAATGTCTAAAGTTGTATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGATGCAACTGTGCAAACTGTTATAACAATGTTGAAAATGAAGCGGCTAGACGAGAAGCTGTTGAAGCTACTTTGGAGCGTAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGCGATAGTAGGGAGGATGCTGGTGAAATCTTAATACTAGGGAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGCGAGTGCTTCCAAGCCAATATCCTATGCTCTGAAAATTGCAAATGTATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACCGGAGCAATTGGATCTTCTGGTTATGCATCCCCTCCAGTGACCAAGAAAAGAAAAGGCCAAGAACTCTTCTTTGGACCAACAACCAAGGATACATCTGTTGGTAGGCTTGGCCAATTTCAACAGGCAAACCATGTAAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTTCCTGGTGCCCGTTTTGGAACTGCAACTTTAGGGCCTTCTAAATTTACATACAGATCGCTTTTGGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGACCCTTACAGACCAGAAAACGCTGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCTGTAGCGTCTTCAACTCAAGAGCAATTGCCAAATCGAAAGGAAGTTGATATTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCTAGTTCAGATGGGGCAGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACCTTAGCCTTGATGTGTGACGAGCAAGATACAATGTTCATGACGGCTCCATCCCCTAATGGTTCAATGGATCATACTTGCAATACATCTTTGCGTTCTCGTTACGGACAAGGCATGACAGAAGTTTATGCAGAGCAAGAAAGGATTGTTTTGACGAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTTGAGATTCAGAAGGAGGCAATCCACGTCAGTGGAAATGCCGGTGCCCAAACAGTGCATCAGCAGCAGGGAGCCACCAGTAATGGAGTTGTCAATGCTGCTGTTGTGCCACCTATGGCCTCTAGTATGAATACGATTGATTCAGAGGCTCCTGGTAATCTTGTCCCTGAAAATGGAGAAAGCAAGTCCAAGATTGAAAAGGATATGTGA 1752 0.4555 MGEGEGGDFPPKNVSSDSLPSDFPAKKLARQLDFTGYSGGAAVPGNSIPQPQAVTPPPRPVITQPVVVTPMPLQAPHSSARVGKPESPKSRSRPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYASPPVTKKRKGQELFFGPTTKDTSVGRLGQFQQANHVKSPAPSSSLSPVPGARFGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKTLMEKNAEDQVETSVASSTQEQLPNRKEVDIEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFMTAPSPNGSMDHTCNTSLRSRYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSEFEIQKEAIHVSGNAGAQTVHQQQGATSNGVVNAAVVPPMASSMNTIDSEAPGNLVPENGESKSKIEKDM 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2735 583 MobiDBLite consensus disorder prediction 39 62 - -
Mibi01g2735 583 Coils Coil 139 159 - -
Mibi01g2735 583 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 106 141 IPR005172 -
Mibi01g2735 583 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 192 226 IPR005172 -
Mibi01g2735 583 ProSiteProfiles CRC domain profile. 105 229 IPR005172 -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 1 27 - -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 374 390 - -
Mibi01g2735 583 PANTHER TESMIN/TSO1-RELATED 44 501 IPR028307 -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 404 426 - -
Mibi01g2735 583 SMART CXC_2 104 144 IPR033467 -
Mibi01g2735 583 SMART CXC_2 189 230 IPR033467 -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 371 436 - -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 75 101 - -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 84 101 - -
Mibi01g2735 583 MobiDBLite consensus disorder prediction 558 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2735 Mibi-ChrMibi01 48665265 48672906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2735 1 522 CPP Transcription Factor Family AT4G29000 58.123 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mibi01g2735 TCR 3.1e-12 No_clan