Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2719 ATGTCTGTGCCAGAGCAAGACTATGTAAGCTTATCATCAGAGACTCCAACAACTCCAACATCATCATCATTAATGGAAAAAAGCTCAGACAAGTTTTCTCAGAGAAGAAACGGGTTGAATCTCAAGGCAACTGAACTACGTCTCGGGTTACCCGGGTCGGAGTCACCCGAAAGGGATTCGGATCCTGAGGATAACAACAAAGAGTATCCATTAGGAATACTGAAGAGTCTCGTTTCTGGGGCCAAAAGGGGATTCTCAGACACCATTAATGGTGGTTCTGGGAAATGGGTTCTCTCTGGAAAAGGTGGTTCTGAAATGGGTTTGGGTAAAGATTGTGTCTTGTTCTCTCCCAGAGGTGTTAACTCTGGCAAGAACTCTGTCGGGTCGGATCATCAATCGGGTTTGGGTCACTCTGTTGTGAAAGATAGTATTCCTCAGCCAACAAAGGCTTTGCATGAGAAGAAGCCTCAGTTTCCTGCTCCTGCTTCAAAGGCACAAGTTGTGGGATGGCCACCAATCCGATCTTTTCGGAAGAACTCAATGGCTTCTCAGCCTCAAAAGAACGGTGATGATGCAGAATCAGGAAAGAGTGGATGTCTTTATGTAAAAGTGAGCATGGATGGTGCTCCATACTTGAGGAAGGTGGATCTCAATAACTTTGCCTCTTACAAGGAACTTTCTTCTGCACTGGAAAAGATGTTCAGTGGCTTTACAATGAGTCAATGCGGCTCCCATGGTGTTTCTGGTCGGGACAATATGAGTGAGAGTAGATTGATGGATCTGCTTAATGGTTCAGAATATGTGCTCACTTATGAGGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGATTCTTGCAAGAGGATGAGGATAATGAAGAGTTCTGAAGCAATTGGGTTAGCACCGAGGGCAATGGAAAAGTGCAAAAGCCGGAACTAG 960 0.4521 MSVPEQDYVSLSSETPTTPTSSSLMEKSSDKFSQRRNGLNLKATELRLGLPGSESPERDSDPEDNNKEYPLGILKSLVSGAKRGFSDTINGGSGKWVLSGKGGSEMGLGKDCVLFSPRGVNSGKNSVGSDHQSGLGHSVVKDSIPQPTKALHEKKPQFPAPASKAQVVGWPPIRSFRKNSMASQPQKNGDDAESGKSGCLYVKVSMDGAPYLRKVDLNNFASYKELSSALEKMFSGFTMSQCGSHGVSGRDNMSESRLMDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRMRIMKSSEAIGLAPRAMEKCKSRN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2719 319 Pfam AUX/IAA family 44 310 IPR033389 -
Mibi01g2719 319 MobiDBLite consensus disorder prediction 1 40 - -
Mibi01g2719 319 FunFam Auxin-responsive protein 194 311 - -
Mibi01g2719 319 SUPERFAMILY CAD & PB1 domains 194 300 - -
Mibi01g2719 319 MobiDBLite consensus disorder prediction 1 71 - -
Mibi01g2719 319 ProSiteProfiles PB1 domain profile. 199 301 IPR000270 GO:0005515
Mibi01g2719 319 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 39 306 IPR003311 GO:0005634|GO:0006355
Mibi01g2719 319 Gene3D - 193 312 - -
Mibi01g2719 319 MobiDBLite consensus disorder prediction 52 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2719 Mibi-ChrMibi01 48359891 48362662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2719 203 309 B3 DNA Binding Superfamily AT4G23980 31.776 2.18e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi01g2719 AUX_IAA 5.9e-89 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2719 01 48359891 48362662 Mibi01g2719 01 48359891 48362662 ECH