Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2708 ATGGAACGGATCGTCGGTGTTAAGTACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTTCGGCGAAATTTACCTCGCCACTCATATCGATACTTTTGAGATAGTCGCGGTGAAAATCGAGAACACTAAAACGAAGCATCCACAGCTGCTTTATGAGGCAAAACTGTATCATGTTCTTCAAGGAGGAAGTGGAATTCCTAGCATAAGGTGGTCTGGTGTAGACGGGGAGGACAATGTGCTAATTATTGATTTGCTGGGACCTAGTCTTGAAGACCTGTTTGTGTATTGTGGAAGAAAATTTTCATTGAAGACTGTATTAATGTTGGCTGATCAGATGATCACCAGAATAGAATATGTTCATTCTAAGGGTTTTCTTCATAGAGATATAAAGCCTGATAACTTTCTCATGGGACTTGGTCGTAAGGCCAATCAGGTTTACATAATTGACTTTGGGCTTGCAAAACGATATCGGGATCCCACCACCAATCGTCATATTCCTTACCGGGAGAACAAAAACTTAACTGGCACTGCACGTTATGCAAGCTGTAATACTCACCTTGGTATTGAGCAAAGCCGACGGGATGATTTGGAGTCACTAGGATATGTTCTTTTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAGGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCATTATTGCCACTCTTTGACGTTTGACCAGCGACCTGATTATGGATTTTTGAAGCGTCTATTCCGAGACTTATTTGCTCGCCAAGGTTTTGAATTTGACTATGTATTTGATTGGACCATTTTAAAGTACCAGCAGACACAGAAGATTAAAGTTCAGCCTCACACATCTCCAGCTCCTGGAACAAGCAACAGTCATGCAATGCCAACAGGTGTTGACAATTCTCATGGTGTTTATGCTTATTCAGGGGATGTCTCAGATCACATTAGATCTGGAAATGCTACTGGTTCTGGTGTTAAGATGCAGTTTAAGTCACCAGCAGCAAAAAATGTAGGTGTTAGTAATCGTCTAGACAAGAATGTTTTTGAAGAAGCAAATATGCCTTCTACTTCATATTCACAAGGTGGCACCTCGAAAAGAAACTCCTTGAAGCCTGCCTTGACCACTGAAGTCGCAAACGCTGGTCGCAGCCAAGGCAGTAAAATTGGTCCTTCAAGTAGCTGGATTTCATCTCTCCAGCAAAATTGGTCCTTCAAGTAG 1293 0.4192 MERIVGVKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENTKTKHPQLLYEAKLYHVLQGGSGIPSIRWSGVDGEDNVLIIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLGKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFARQGFEFDYVFDWTILKYQQTQKIKVQPHTSPAPGTSNSHAMPTGVDNSHGVYAYSGDVSDHIRSGNATGSGVKMQFKSPAAKNVGVSNRLDKNVFEEANMPSTSYSQGGTSKRNSLKPALTTEVANAGRSQGSKIGPSSSWISSLQQNWSFK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2708 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2708 430 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2708 430 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2708 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mibi01g2708 430 FunFam Casein kinase I isoform delta-like 1 339 - -
Mibi01g2708 430 PANTHER CASEIN KINASE-RELATED 13 362 - -
Mibi01g2708 430 MobiDBLite consensus disorder prediction 402 430 - -
Mibi01g2708 430 SUPERFAMILY Protein kinase-like (PK-like) 7 290 IPR011009 -
Mibi01g2708 430 Gene3D Transferase(Phosphotransferase) domain 1 1 325 - -
Mibi01g2708 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mibi01g2708 430 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2708 Mibi-ChrMibi01 48161366 48168413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2708 9 215 EF-hand Containing Proteins AT4G23650 30.047 5.28e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mibi01g2708 Pkinase 2.6e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2708 01 48161366 48168413 Mibi01g2708 01 48161366 48168413 ECH