Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2705 ATGAACCAACTGGGTTTTCATCTTCTGGTTCTGTATCTCATAATATTCTTCATTAGAATATTTCCCTGTGAAGCACAGAATTCATCAAATAATAATGCTCATTCTTCACAAGATGCTGTCACAAATTTCAAACCAAGTCTTGCTGTTGTAATGGCAATACTGAGTTTTTTGTTTGTTCTAACATTCTTTCTCGTCATCTATGTCAAATGTTGTGGTAACAGAGGAAATTCATCAGTTCATGGAAACCCAGAAAGTCAACCTTGGCTTATCAGAACAAGGTCAACGAGATTCTCAGGAATAGACAAGGCTGCCATAGAATCACTTCCTTTCTTCAGATTCTCTTCCTTAAAAGGATCAAAAGAAGGACTTGAATGTGCTGTTTGCTTGTCAAAGTTTGAAGATGTTGAGATTCTAAGGCTTCTTCCAAAATGTAAACATGCTTTTCACATTAATTGTATTGATCATTGGCTTGAGAAGCATTCTAGTTGTCCTCTTTGTAGGCACAAGGTTGATCCTGAAGATCACTCCATTTTCACATACTCTCACAGCTTGAGGCTGCTGATCAATGGCGGCGGAAACGCAGAATTCGGAGGAGAAGAATCATCCAATTTAGGGCTTTTTGTTCAGAGAGAGGAAGAAGAAGAAGAGAAAAATAATGGGTCATCATCAAGATTCAATTTTGGAAGCAGCTTTAGGAGAATCATGAACATAAAGGGTTCTTCTTCAAAAGAAGAAGAATTGCCTATTCAAAAACCAGCTCATGATCATGATGATAACAGAAGAAAGGTGTATCACAAGCTCAAACACAAGATTAGTGTATCAGATTTTGTTTTGAAGAATCGATGGAGCAATGTTAGTTCCTCGGATCTCATGTTCTTGAACTCAGAGATGATTGGTTCTGCTTCAAGTTTAAGATTCAACAACAATGGTGAACAGAGTCAGGGTACAACAGGGGAAGCAGGAAATGATGATGAGCAAGTTATTATGATGAATCTGAAGGAGGAGATGGAGAGGAAGGTTTCATTTGAGAACAAAGTGAGCGGAGTACTACTAAAGAAGAAGAACAATCTGAATTCTGATTCAGATTCTGCAGGAAAAAATAATTTTATGAGTGACACATCTTCAAAGTATATAATGATGAATCCAGATGATGAGAAAAGATCAGTTTCAGATATAACTGCTATGTCTAGATTTGGAGGTTTGGGTATGAAAATTAATGGTAACCTTAACAATAATAAAGGTTCTTCTTCTTCTTCTTCATCTTTGGTTGATCATCATCAGAAGAATGTGAAAGAGGAAAGAATGAGACAAATTTGGCTTCCAATTGCCAAAAGAACTGTTCAATGGTTTGTGAACAGAGAAAAAAGGTTTCAGCAATCTCTGAATAATAATGTATAG 1398 0.3648 MNQLGFHLLVLYLIIFFIRIFPCEAQNSSNNNAHSSQDAVTNFKPSLAVVMAILSFLFVLTFFLVIYVKCCGNRGNSSVHGNPESQPWLIRTRSTRFSGIDKAAIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEILRLLPKCKHAFHINCIDHWLEKHSSCPLCRHKVDPEDHSIFTYSHSLRLLINGGGNAEFGGEESSNLGLFVQREEEEEEKNNGSSSRFNFGSSFRRIMNIKGSSSKEEELPIQKPAHDHDDNRRKVYHKLKHKISVSDFVLKNRWSNVSSSDLMFLNSEMIGSASSLRFNNNGEQSQGTTGEAGNDDEQVIMMNLKEEMERKVSFENKVSGVLLKKKNNLNSDSDSAGKNNFMSDTSSKYIMMNPDDEKRSVSDITAMSRFGGLGMKINGNLNNNKGSSSSSSSLVDHHQKNVKEERMRQIWLPIAKRTVQWFVNREKRFQQSLNNNV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2705 465 MobiDBLite consensus disorder prediction 304 323 - -
Mibi01g2705 465 FunFam RING-H2 finger protein ATL43 100 174 - -
Mibi01g2705 465 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Mibi01g2705 465 MobiDBLite consensus disorder prediction 408 428 - -
Mibi01g2705 465 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 176 IPR013083 -
Mibi01g2705 465 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 455 - -
Mibi01g2705 465 SUPERFAMILY RING/U-box 104 173 - -
Mibi01g2705 465 CDD RING-H2_PA-TM-RING 124 167 - -
Mibi01g2705 465 MobiDBLite consensus disorder prediction 304 321 - -
Mibi01g2705 465 SMART ring_2 125 166 IPR001841 -
Mibi01g2705 465 MobiDBLite consensus disorder prediction 408 424 - -
Mibi01g2705 465 Pfam Ring finger domain 124 167 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2705 Mibi-ChrMibi01 48064754 48066151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2705 11 458 C3H Transcription Factor Family AT4G28890 44.227 8.33e-107 322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2705 01 48064754 48066151 Mibi01g2705 01 48064754 48066151 ECH