Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2699 ATGGCTGAGCCACCCCTTAGCTCAGAAACAGGCACTTCCACCAACTGCTCATCTCCATCTACATCTTCCTCTTCCTCATCTTCCTCATCTCCTGCTCAACAGAAGAAGCAAAAAAGAGGCAGAGAAGAAGACAATAACAACAACAACAACAATAGCATTAGCAAGCACCCACTTTACAGGGGAGTCAGAATGAGAACATGGGGGAAATGGGTATCAGAAATCAGAGAACCCAGAAAGAAGAATCGGATCTGGCTCGGAACTTTCGCCACAGCTGAGATGGCCGCACGTGCACACGACGTCGCCGCCCTCACCATTAAAGGCTCCTCTGCCATCCTCAACTTCCCTGACCTCGCTCCTTTACTCCCCCGACCAGCCTCCAAATCCCCACGTGATGTTCAGGCTGCCGCCGCCAAGGCTGCCTCCATGGAGATTCCCAACAACAACAATCCCACAACGGCCTTGTGTTCATTCTCCTCCTCCTCAGCCGATGTTTCTACCCCAGAAGAGGAACTCGGGGAGATAGTGGAGTTACCATCTTTGGGCTCGGGTTTTCCGGAACCCGACCCGAATAATGATTTCGTGTTTTTCGACCCGGTTGATGGATGGTCCTATCCTCACCCGTGGTGGTATCACAGCCTCTGTGATGATGATGATGAGAATAAGAAGTACTGTTGTTGTGGTGGTGGTGGTGGTGGTGGATATTTCAGTGTGGATCACAATTCACTACAAGAAGAGGGGACAGAGGGTTTGATTCTTTGTGGTTTTGAGGGCTCATTGTGGCAACATTAG 789 0.5057 MAEPPLSSETGTSTNCSSPSTSSSSSSSSSPAQQKKQKRGREEDNNNNNNNSISKHPLYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALTIKGSSAILNFPDLAPLLPRPASKSPRDVQAAAAKAASMEIPNNNNPTTALCSFSSSSADVSTPEEELGEIVELPSLGSGFPEPDPNNDFVFFDPVDGWSYPHPWWYHSLCDDDDENKKYCCCGGGGGGGYFSVDHNSLQEEGTEGLILCGFEGSLWQH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2699 262 FunFam Ethylene-responsive transcription factor 2 57 116 - -
Mibi01g2699 262 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Mibi01g2699 262 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Mibi01g2699 262 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
Mibi01g2699 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 181 - -
Mibi01g2699 262 SUPERFAMILY DNA-binding domain 58 116 IPR016177 GO:0003677
Mibi01g2699 262 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Mibi01g2699 262 CDD AP2 57 117 IPR001471 GO:0003700|GO:0006355
Mibi01g2699 262 MobiDBLite consensus disorder prediction 1 34 - -
Mibi01g2699 262 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Mibi01g2699 262 MobiDBLite consensus disorder prediction 1 58 - -
Mibi01g2699 262 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2699 Mibi-ChrMibi01 47870306 47871094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2699 1 208 AP2-EREBP Transcription Factor Family AT5G11590 53.153 1.32e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g2699 AP2 2.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g2699 01 47870306 47871094 Mibi01g2699 01 47870306 47871094 ECH