Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2685 ATGGGAAATTCAACTCCATTCTTCTTCTCCTTCCTCTTCTTCCTTCTCTTTCTGAGCTGTGTGAATTCTCAGTCTGAACTGTATAATCAAGAACATACAGTTTTGCTGAGGATAAAACAGTACTTTCAAAACCCACCTTCTCTTAGTCACTGGACAAATTCAGATTCATCATCTCATTGTTCATGGCCAAAGATCACCTGCATCAATAACTCTGTTACAGGGCTGGCTCTGACCAACATCAACATAAGCCAACCAATACCAAATTTCATCTGTGAGCTTAAAAATCTCACTTCCATTGATTTTCAATGGAATTTCATTCCTTTGGAGTTCCCAACGTATCTCTATAACTGCTCCAAGTTAAACTACCTGGACCTTTCTAATAATTACTTTGTTGGTAAGGTTCCAGAGGACATTGACCGATTGGCCGGCCTTCGCTTTCTTAACCTCGCTGGGAACAACTTTTCCGGCGAGATTCCGGTGAGTATCACAAAGTTGAAAGAGCTCACAAGTCTTCGGCTTGATTACTGTCTATTCAATGGTACTATCCCAAGTGAAATAGGCAACTTATCCGATCTTGAAGTCTTGAATTTGGCCAACAACTCATTCTCTCCTTCAAACTTCCCTTCTAGCTTCATCAAGCTCACAAAATTGAAAGAATTTGTGTTAACTAATTGCAGCTTGATTGGCGAAATCCCGGAAAGTATTGGACAACTGGCAGCCTTAGAGACGTTGGATTTATCCATGAATCAGTTAAGTGGCAAAATTCCAAGTAGTTTGTTTATGCTGAAGAATCTAAGCATAATGTTTCTTTCAAGGAATCAACTTAATGGAGAGTTACCTCAAGTGATTGAAGCTTTAAACTTGACAATCATTGATCTTGCTCAGAACAATCTTACAGGAAAAATACCTAATGCCGTAGGAAATCTCCATAAGCTAACTGGTTTGAACTTTGGTTTTAATCAATTATCAGGTGAGATTCCAGAAATCGTAGGACGTCTTCAATCTATAATCGATTTTAGCATCTTCTTCAACAATTTATCAGGCAATATTCCTCCAGAGTTTGGTCTCCTTTCAAATCTAAGAAGATTTGAGATTTCATCAAACAACTTCATAGGCGGTCTTCCTCAGAACTTGTGTTACCATGGGAATTTGCTTAGGCTAACAGCTTATGACAACAAACTCAGTGGGGAATTGCCAGAATCATTGGGAAATTGTAGCAGCTTGCTAGAGTTGAGAATCAACAATAATGAGCTCTCTGGTGAAATTCCTAGCAGCCTATGGAAGTCTCAGACTTTGTCAACTTTCATGATCAATGACAATAAGTTTACAGGTGAGCTTCCTGAAACATTGCCTGTGAACGTTTCACTCATGGCAATTAGTTATAATCAGTTTTCTGGTAGAATCCCAACAGGAATATCTTCCATGAAGAATCTTGTTGAGTTTAATGCAAGTAGCAACCTCTTTAATGGAAGTATTCCTCAAGAACTAACCAGTCTTTCGCAGCTAGCAACTTTGTTGCTTGATCAGAATAAACTCTCTGGCCCACTTCCATCCAAAATTATATCATGGCAATCTCTGAGAACCCTGAACTTGAGTCAAAACCAACTCTCTGGAGAAATCCCGGAGTCATTTGGTCGTTCACTCGACCTTTCACAACTAGACTTATCAGAAAATCAACTATCTGGCCAAATTCCATCTCAACTAGCCGTTTCGAATCCCAGTGTTCTCAACCTTTCATCTAATCAATTTTCTGGGAAGATTCCTAGTGAATTTGATAATCTTGCTTATGCCAATAGCTTTTTGAACAATTCTGGTCTTTGTGCTGATACAAGTGGGTTAAACCTTAAATTGTGCAATTCTGGTTCTGTCTCTCAAAGTTCAAGCAAAGGCTCATCGTCTATTGGGTTGATCATAGGCCTTGCTATAGCAGCCTGCATAGCAATTATCTTGTTGTCACTTTTGATTATGAGATTCTACCGAAGGAGAAAGCAAGAATTGGACACTTCATGGAAGCTGATTTCATTCCAAAGGTTAAGTTTCACAGAATCAAACATTGTCTCCTCCATGACAGATTATAACATGATAGGCAGTGGGGGGTACGGCATTGTGTATCGTATTGCTGTCAACGATGATGTAGGCTATGTTGCTGTGAAGAAGATAAGCAATAATAGGAAGTTGGATCAGAAACTTGAGAATGCATTTCATGCAGAAGTTGAAATCTTGAGCACTATTCGTCACATTAACATAGTGAAGTTGCTATGTTGTATGTCTAATGAGGATTCTCTACTCCTTGTTTATGAGTATATGGAAAATCGAAGTCTTGATAAGTGGCTACACAAGAAGAACATTGATGGCTTATCAGCTGTTTTTCTTGATTGGCCAAAGAGAATGCAAATAGCCATTGGGATTGCACAAGGCTTGAGCTACATGCATCATGACAACTCACCGCCTATTATTCATCGCGATGTGAAAGCAAGTAATATTCTTTTGGATTCTCGGTTCAATGCAAAAGTTGCAGATTTTGGCCTTGCAAGGAACTTGATCAAAACTGGACAACATGATACTATGTCAGCTGTTGTTGGCTCTTTTGGTTACATTGCTCCAGAATATGCTCAAACAAAAAGAGTCAACGAAAAGGTTGATGTATTTAGCTTTGGGGTTATCCTGTTGGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAACACTCTTCTCTTGCACAATGGGCATGGCGTCAGATTCAATTAGGAAACAACATAGAACAAGATCTAGACGAAGATGTTAAGGAGACTTTGTACTTAGAGGAAATGTGCAGTGTCTTCAAGCTTGGGGTGATGTGTACAAGCAAAGAACCAGCTAGTAGACCTTCCATGAAAGAGGTTCTGAATATATTGCTGCGCATGAAAGAACCAGTTAGTCATATAGAAACGAATATTGGTCATTTTGAGGTTGTTCCTCTACTAAAGAATTCTAAAAGGGAGAGTAGAATAGATATTGATGATAATGATAGCTAA 3018 0.3897 MGNSTPFFFSFLFFLLFLSCVNSQSELYNQEHTVLLRIKQYFQNPPSLSHWTNSDSSSHCSWPKITCINNSVTGLALTNINISQPIPNFICELKNLTSIDFQWNFIPLEFPTYLYNCSKLNYLDLSNNYFVGKVPEDIDRLAGLRFLNLAGNNFSGEIPVSITKLKELTSLRLDYCLFNGTIPSEIGNLSDLEVLNLANNSFSPSNFPSSFIKLTKLKEFVLTNCSLIGEIPESIGQLAALETLDLSMNQLSGKIPSSLFMLKNLSIMFLSRNQLNGELPQVIEALNLTIIDLAQNNLTGKIPNAVGNLHKLTGLNFGFNQLSGEIPEIVGRLQSIIDFSIFFNNLSGNIPPEFGLLSNLRRFEISSNNFIGGLPQNLCYHGNLLRLTAYDNKLSGELPESLGNCSSLLELRINNNELSGEIPSSLWKSQTLSTFMINDNKFTGELPETLPVNVSLMAISYNQFSGRIPTGISSMKNLVEFNASSNLFNGSIPQELTSLSQLATLLLDQNKLSGPLPSKIISWQSLRTLNLSQNQLSGEIPESFGRSLDLSQLDLSENQLSGQIPSQLAVSNPSVLNLSSNQFSGKIPSEFDNLAYANSFLNNSGLCADTSGLNLKLCNSGSVSQSSSKGSSSIGLIIGLAIAACIAIILLSLLIMRFYRRRKQELDTSWKLISFQRLSFTESNIVSSMTDYNMIGSGGYGIVYRIAVNDDVGYVAVKKISNNRKLDQKLENAFHAEVEILSTIRHINIVKLLCCMSNEDSLLLVYEYMENRSLDKWLHKKNIDGLSAVFLDWPKRMQIAIGIAQGLSYMHHDNSPPIIHRDVKASNILLDSRFNAKVADFGLARNLIKTGQHDTMSAVVGSFGYIAPEYAQTKRVNEKVDVFSFGVILLELTTGKEANYGDEHSSLAQWAWRQIQLGNNIEQDLDEDVKETLYLEEMCSVFKLGVMCTSKEPASRPSMKEVLNILLRMKEPVSHIETNIGHFEVVPLLKNSKRESRIDIDDNDS 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2685 1005 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 381 622 - -
Mibi01g2685 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Mibi01g2685 1005 Gene3D Phosphorylase Kinase; domain 1 665 768 - -
Mibi01g2685 1005 ProSiteProfiles Leucine-rich repeat profile. 525 547 IPR001611 GO:0005515
Mibi01g2685 1005 FunFam Receptor-like protein kinase HSL1 669 768 - -
Mibi01g2685 1005 Gene3D Ribonuclease Inhibitor 340 625 IPR032675 -
Mibi01g2685 1005 SUPERFAMILY L domain-like 28 286 - -
Mibi01g2685 1005 Gene3D Ribonuclease Inhibitor 206 339 IPR032675 -
Mibi01g2685 1005 SMART serkin_6 689 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2685 1005 ProSiteProfiles Protein kinase domain profile. 689 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2685 1005 SMART LRR_typ_2 189 214 IPR003591 -
Mibi01g2685 1005 SMART LRR_typ_2 141 165 IPR003591 -
Mibi01g2685 1005 SMART LRR_typ_2 238 262 IPR003591 -
Mibi01g2685 1005 SMART LRR_typ_2 523 547 IPR003591 -
Mibi01g2685 1005 SMART LRR_typ_2 309 333 IPR003591 -
Mibi01g2685 1005 SMART LRR_typ_2 357 381 IPR003591 -
Mibi01g2685 1005 SUPERFAMILY RNI-like 255 602 - -
Mibi01g2685 1005 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 961 - -
Mibi01g2685 1005 Pfam Leucine Rich Repeat 525 545 IPR001611 GO:0005515
Mibi01g2685 1005 Pfam Leucine Rich Repeat 287 309 IPR001611 GO:0005515
Mibi01g2685 1005 Gene3D Transferase(Phosphotransferase) domain 1 769 982 - -
Mibi01g2685 1005 FunFam Receptor-like protein kinase HSL1 isoform A 28 180 - -
Mibi01g2685 1005 Pfam Protein kinase domain 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2685 1005 SUPERFAMILY Protein kinase-like (PK-like) 689 982 IPR011009 -
Mibi01g2685 1005 FunFam Kinase family with leucine-rich repeat domain-containing protein 769 982 - -
Mibi01g2685 1005 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 378 - -
Mibi01g2685 1005 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 185 282 - -
Mibi01g2685 1005 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Mibi01g2685 1005 Pfam Leucine rich repeat 111 154 IPR001611 GO:0005515
Mibi01g2685 1005 Gene3D Ribonuclease Inhibitor 28 205 IPR032675 -
Mibi01g2685 1005 ProSitePatterns Protein kinases ATP-binding region signature. 695 719 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2685 Mibi-ChrMibi01 47350269 47354013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2685 31 1004 Receptor kinase-like Gene Family AT5G25930 50.153 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g2685 Pkinase 2.6e-52 CL0016