Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2684 ATGCCAGGTTACTTACACTCCCTTTTCTACTCTTTCTTCTTCTTCTTTGTCCTGAGTGATGCTGAGACTAAGTCTCCTCTGTATGATCAAGAACATGCAGTCCTACTTAACATAAAGCAACACCTTCATCCATTCCTCAACCAGTGGGCCCCAATTGATTCCCCTCATTGTTCATGGCTTGGGATCAACTGTACCAATGGCGTTGTGACAAAACTAGATTTTGGTAACATGAACATCACCAAAACAATACCTCCTTTCATTTGTGACCTCAAAAATCTCATCCACATTGATTTTCAGCTTAATTATTTCTCTGGGGAGTTCCCAAAATTTCTCTTCAATTGCTCCAAGCTTGAGTACCTTGACCTCTCCTCGAACAACTTTGAGGGTCCGATTCCAAACGACATTGATCAATTGGCCAACCTGCGCTTCCTTAATCTTGGCGACAACAATTTCTCCGGCGACATCCCGGCGAGCGTAGGAAGGTTAAAGGAACTGAGAAATCTTCAACTTCCCGAGAATCAATTTAACGGCAGCATCCCAGATGAAATAGGAGACTTGTCCAATCTTGAATTATTAGACCTGCGTCTAAACACGGATCTCCCTCCTACACAGTTGCCGGCAAGCTTCACCAAGTTGAAGAAAATGAAGAACTTATGGATGTCCACTATGAATTTGATTGGGAAAATTCCAGAAAGTATTGGAGAGCTGGTGAGTTTGGAAGAATTGGATTTATCTGATAATGGCTTAAGTGGGCAAATCCCCAGTGGCTTGTTTGCTCTGAAGAATCTTAGCATATTGTATCTTTGGAAAAATAGGCTCTCTGGGGAAATACCTACAGAAATTGAAGCTCTGAATCTGACTGTGTTAGATATTTCAAGGAATTCTCTCACTGGAAAAATCCCAGATGGTTTAGGGAAGCTCAAAAAGCTGACAGGTTTGAGTTTGGATATGAATCAACTATCAGGAGAGATACCAAAAAGCCTTGCTAATCTACCAGCTCTGGTAAATTTCATGGTTTTTCAAAACAATCTCTCTGGTACTCTTCCTCCTTACTTCGGCCGTTATTCGCCACTCAAAACCTTTCAGGTTGCAACCAATAGACTGACAGGAAAATTGCCAGAGGATTTGTGTTACAATGGCATGTTAGTTGGAGTTAGTGCTTATGATAACAATCTAAGTGGGGAGTTGTCAGAATCGCTAGGGAGCTGCAATAGCCTGCAGTACTTGTTTCTTCAAAATAATAGTTTTTCTGGCGAAATCCCTGGTGGCTTGTGGACGTCATACAATTTGATAAGTTTAATGATCAACAGCAACAAGTTCACCGGCGTGCTACCTCAAAGATTGGCTTGGAATCTTTCAACTTTGCACATAAGCAACAATCAATTCTATGGTAGAATTCCAGTAGGAGTATCTACCTGGAAGAATCTGGTGGAGTTTAAAGCTAGTAATAATCTCTTCAATGGGAGTATTCCACAAGAGCTAACCACTCTTTCCATGGTGGAAAAGTTGTTTCTTGATCACAACCAGCTAACCGGGCCTCTTCCATCAGAAATCATATCTTGGAAATCTCTCAATGCTCTAGATTTGAGCCACAATCAACTTTCTGGACCAATCCCAGATTCAATTGATAATTTACTTGACCTGTCACAGCTAGACCTGTCAAATAATGAGCTCTCAGGTCGTGTTCCGCCTCAACTTGGTAAATTGTCAATGAGACTCACAAATCTCAATCTTTCCTCCAATCTTTTCACAGGGAAGATTCCTAGAGAATTTGAAAACCCTGCCTACTCCGACAGCTTTCTAAACAATTCTGGTCTGTGTGTCGATACCAAAAAGCTAAACCTTCCCTTATGCAACTCTGGTTCTGGTCTTCAAACTATAAGCAAGAGACCATCTGTGTCTCTTGGTTTGATCATAGGCCTTGTCATTGTGGCCTCTTTAGCAGCTTTCTTGGTTTTACACTTGATTATTAGAGTATACAAATCAAGAAAGCAAGATATGGACAATTCATGGAAGTTGATGTCCTTTCAGAGGCTAAGTTTCTCACATATGAACATTGTTTCATCATTGACAGATGATAATATTATAGGCAGTGGTGGGTATGGTACAGTATACCAAGTCCCCGTTGATTGTTTAGGCTATGTTGCTGTGAAGAAGATATTCAGTAACAAGAAGTGGGAACAGAAACTTGAGGATGCATTCTTAGCAGAAGTAAAGATTTTAAGTAACATTCGTCACAACAATATTGTGAAGCTGTTGTGTTGCATGTCAAGTGGTGATTCTTTGCTTCTTGTGTATGAATATCTAGAGAACCATAGCCTTGATCGCTGGTTGAGCAAGAAGAATAGGTTGAGCCATAATTTTGTTCTTGATTGGCCGAAAAGATTGCAGATTGCCATTGGTGCTGCACAAGGTCTGACCTATATGCACCATGATTGCTCCCCTCCCGTCGTTCATCGTGATATCAAGACAAGTAACATCTTGTTGGATTCTGAATTCAATGCAAAGGTTGCAGACTTTGGTCTAGCAAGAATATTGATCAAGCCAAGCGAACTCACCATGTCAGCAGTAGCCGGATCATTTGGCTATATTGCTCCTGAATATATTCAGACAGGGAAAATCAATGAAAAGATTGATGTTTATAGCTTTGGGGTGGTGTTGCTGGAACTAACAACTGGGAAAGAAGCGAATCGTGGAGATGAACATTCATCTCTTGCAGAATGGGCATGGCGACACGTGCAGTTGGGTGGAGATGTAGAGGAAGTTCTAGACAAAGAAATTATGGAAGCATGCTATATGGAAGAAATATGTCGTGTGTTCAAACTTGGGGTGATGTGTACTGCAATACTACCAGCTAGTAGACCTTCCATGAAGGAGGTTCTGCTATTACTGCTTCGTTGCAGGGACCCATATGGTTATGGAGAAAGGAGTCCTGGAATCTTTGATGTTGTTCCTCTCCTGAAGAATTCCAAGAGGGAAAGTAGATTGGATAGTGATGATGATTTATAG 3009 0.4114 MPGYLHSLFYSFFFFFVLSDAETKSPLYDQEHAVLLNIKQHLHPFLNQWAPIDSPHCSWLGINCTNGVVTKLDFGNMNITKTIPPFICDLKNLIHIDFQLNYFSGEFPKFLFNCSKLEYLDLSSNNFEGPIPNDIDQLANLRFLNLGDNNFSGDIPASVGRLKELRNLQLPENQFNGSIPDEIGDLSNLELLDLRLNTDLPPTQLPASFTKLKKMKNLWMSTMNLIGKIPESIGELVSLEELDLSDNGLSGQIPSGLFALKNLSILYLWKNRLSGEIPTEIEALNLTVLDISRNSLTGKIPDGLGKLKKLTGLSLDMNQLSGEIPKSLANLPALVNFMVFQNNLSGTLPPYFGRYSPLKTFQVATNRLTGKLPEDLCYNGMLVGVSAYDNNLSGELSESLGSCNSLQYLFLQNNSFSGEIPGGLWTSYNLISLMINSNKFTGVLPQRLAWNLSTLHISNNQFYGRIPVGVSTWKNLVEFKASNNLFNGSIPQELTTLSMVEKLFLDHNQLTGPLPSEIISWKSLNALDLSHNQLSGPIPDSIDNLLDLSQLDLSNNELSGRVPPQLGKLSMRLTNLNLSSNLFTGKIPREFENPAYSDSFLNNSGLCVDTKKLNLPLCNSGSGLQTISKRPSVSLGLIIGLVIVASLAAFLVLHLIIRVYKSRKQDMDNSWKLMSFQRLSFSHMNIVSSLTDDNIIGSGGYGTVYQVPVDCLGYVAVKKIFSNKKWEQKLEDAFLAEVKILSNIRHNNIVKLLCCMSSGDSLLLVYEYLENHSLDRWLSKKNRLSHNFVLDWPKRLQIAIGAAQGLTYMHHDCSPPVVHRDIKTSNILLDSEFNAKVADFGLARILIKPSELTMSAVAGSFGYIAPEYIQTGKINEKIDVYSFGVVLLELTTGKEANRGDEHSSLAEWAWRHVQLGGDVEEVLDKEIMEACYMEEICRVFKLGVMCTAILPASRPSMKEVLLLLLRCRDPYGYGERSPGIFDVVPLLKNSKRESRLDSDDDL 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2684 1002 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 182 282 - -
Mibi01g2684 1002 ProSiteProfiles Protein kinase domain profile. 690 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2684 1002 Gene3D Ribonuclease Inhibitor 284 377 IPR032675 -
Mibi01g2684 1002 Gene3D Ribonuclease Inhibitor 378 491 IPR032675 -
Mibi01g2684 1002 SUPERFAMILY RNI-like 286 591 - -
Mibi01g2684 1002 Gene3D Ribonuclease Inhibitor 492 615 IPR032675 -
Mibi01g2684 1002 Pfam Protein kinase domain 692 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2684 1002 Gene3D Phosphorylase Kinase; domain 1 671 768 - -
Mibi01g2684 1002 FunFam Kinase family with leucine-rich repeat domain-containing protein 769 977 - -
Mibi01g2684 1002 SMART serkin_6 690 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2684 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Mibi01g2684 1002 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Mibi01g2684 1002 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Mibi01g2684 1002 Pfam Leucine Rich Repeat 285 307 IPR001611 GO:0005515
Mibi01g2684 1002 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515
Mibi01g2684 1002 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515
Mibi01g2684 1002 FunFam Leucine-rich repeat receptor-like protein kinase TDR 304 620 - -
Mibi01g2684 1002 SMART LRR_typ_2 307 331 IPR003591 -
Mibi01g2684 1002 SMART LRR_typ_2 138 162 IPR003591 -
Mibi01g2684 1002 SMART LRR_typ_2 236 260 IPR003591 -
Mibi01g2684 1002 SMART LRR_typ_2 545 569 IPR003591 -
Mibi01g2684 1002 SMART LRR_typ_2 497 521 IPR003591 -
Mibi01g2684 1002 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 203 959 - -
Mibi01g2684 1002 Gene3D Transferase(Phosphotransferase) domain 1 769 972 - -
Mibi01g2684 1002 PRINTS Leucine-rich repeat signature 545 558 - -
Mibi01g2684 1002 PRINTS Leucine-rich repeat signature 524 537 - -
Mibi01g2684 1002 SUPERFAMILY RNI-like 70 375 - -
Mibi01g2684 1002 SUPERFAMILY Protein kinase-like (PK-like) 679 964 IPR011009 -
Mibi01g2684 1002 Gene3D Ribonuclease Inhibitor 28 177 IPR032675 -
Mibi01g2684 1002 Gene3D Ribonuclease Inhibitor 178 283 IPR032675 -
Mibi01g2684 1002 FunFam Receptor-like protein kinase HSL1 isoform A 28 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2684 Mibi-ChrMibi01 47339405 47342507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2684 31 1002 Receptor kinase-like Gene Family AT5G25930 51.064 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g2684 Pkinase 6.5e-48 CL0016