Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2680 ATGGCAACAGTAATCCAATTGCTTGCTAAAATGCCATATTACTTTTACTTCATATTCCTCCTCTTCTTCATTGTCCTGAGATTTTCTGAGTCCAAGTTTCTGTATGATCAAGAACACGAAGTCCTACTCAACATAAAACAGTACTTTGATCCATTTCCTTATCAGTGGGAAGTATCCATAGCCTCACATTGTTCTTGGCCTGGCATCAACTGCACCCATAACTCAGTCACAAAACTAGATTTCGCTAACATGCACATCACCAAAACGGTGCCTCCATTCATATGTGACCTCAAAAATCTCACCTTTATCGATTTTCAGAGTAATTTATTTTCTGAGGAGTTTCCAAAATCTCTCTACAACTGCTCCAAGCTGGAGCATCTTGACCTCTCCATGAACAACTTTGTGGGTCCCATTCCAAATGACATTGACCGATTGGCCAACCTTCGTTACCTTAATCTTGGAGCCAACGATTTCTTCGGCGACATTCCGGCGAGCATAGGGAGGTTGAAGGAGCTGAGAAATCTTCTACTTGACTGGTGTGGATTTAACGGCAGTATCCCAGATGAAATAGGAGACTTGTCCAATCTTGAAGTGTTAGACCTGAGTTCAAACAACGTTCTTCCTCCCACACAGTTGCCGGCAAGCTTCACCAAGTTGAAGAAAGTGAAGAACTTGTGGATGTCCTCTATGAATTTGATTGGGAAAATTCCAGAAAGTATTGGAGAGCTGGTGAGTTTGGAAGAATTGGATTTATCTGAGAATGGCTTAAGTGGGAGAATCCCCAGTGGCTTGTTTGCTCTGAAGAATCTTAGCATATTGCATCTTTCGACAAATGGGCTATCTGGGGAAATACCTACAGAAATTGAAGCTTTGAATCTCGTTGTATTCGATGTTTCAGATAATATTCTTACTGGGAAAATACCTAGCGGCCTTTGGACGTCCCATAATTTGACATCTTTATTTATCAGCAACAACAAGTTCACCGGTGAGCTCCCTCAAAGATTTTCTTCAAATCTGGTCCAGTTATGGGCGAGTAAGAATCTCTTCAATGGAAGTATTCCACAGCAGCTAACGGCTCTTCCCTATCTGAAAGAGTTGTCACTTGATCAGAACAAGCTAATAGGGCCACTGCCATCAGAAATCATAAATTGGAAGACGCTCGTGACTCTGAATTTGAGCCACAATCAACTCTCTGGACATATCCCAAATGCAATCAGTAGTTTACCTTTACTTGAAATTCTGGACTTGTCAGATAATCAATTCTCTGGTCAAGTTCCACCTCCACTTGGTAAATTGTCAATAACACTCAAAATCCTCAATCTCTCCTCCAACCATTTCACGGGGAGATTTCCTAGTGAATTTGAAACTTTTTGTTATTCCTACAGGTTTCTCAACAATTCTGGTCTTTGTGCTGATATATCTATACTAAACATTCCCTTGTGCAATTCTAGAAAGAAGTCATCTGTGATCGTAGTCATCACCCTAGAGGTCTCCTTAGTAGCTTTGTTGGTGTTGATCTTATTAATTCTCAGAGTATACAAAACAAGAAGAAAGCAAAAATCAGATACTTCATGGAAGCTTATTTCCTTTCAAAGGTTGAATTTCACTGAAAAAGATATCGTGTCCTCGATGACAGATGAAAATGTTATAGGGAGAGGTGGTTTTGGTACTGTATATCGTGTTGCTGTTGAAGGTTTTGGCCATGTTGCTGTGAAAAAGATATCAAACAACATATCAGCGAAGGAGATTAAGAATACATTCGAAGCAGAAGTTAAGATCTTGGGCAATATTCGTCATCGAAATATTCTGAAGATCTTGTGTTGTATTTCTAACAAGAATACTCTGCTACTTGTGTGTGAATATCTGGAAAACCATAGCCTTGATCGCTGGTTGAACAAGAAGAATAGGTTAAACCACACTTTTGTTCTTGATTGGCCAAAAAGATTGCAGATAGCCATTGGAGCTGCACATGGTCTCGCCTATATGCACCAATTTCAGTATGCTCAAACAGTAAAGATCACCAAAAAGATTGATGTGTATAGCTTTGGAGTTGTTCTATTGGTACTGACAACTGGAAAAGAAGCTAATCGCGGAGATGAATACTCATCTCTTGCACAATGGGCAAGGCGACACGTCCAGCTTGGTGAAAATGTGGAAGAAGTTCTAGATGAAGAAATTAAGGAGGCACGCTTTTTAGATGAAATGTGTCGTGTCTTCATACTTGGTTTGATGTGTACAACAATAAAACCAGCTAGTAGACCTTCCATGAACGAGGTGTTGTCAATATTGCTTCGTTGCAAGGATCCATCATAG 2313 0.4008 MATVIQLLAKMPYYFYFIFLLFFIVLRFSESKFLYDQEHEVLLNIKQYFDPFPYQWEVSIASHCSWPGINCTHNSVTKLDFANMHITKTVPPFICDLKNLTFIDFQSNLFSEEFPKSLYNCSKLEHLDLSMNNFVGPIPNDIDRLANLRYLNLGANDFFGDIPASIGRLKELRNLLLDWCGFNGSIPDEIGDLSNLEVLDLSSNNVLPPTQLPASFTKLKKVKNLWMSSMNLIGKIPESIGELVSLEELDLSENGLSGRIPSGLFALKNLSILHLSTNGLSGEIPTEIEALNLVVFDVSDNILTGKIPSGLWTSHNLTSLFISNNKFTGELPQRFSSNLVQLWASKNLFNGSIPQQLTALPYLKELSLDQNKLIGPLPSEIINWKTLVTLNLSHNQLSGHIPNAISSLPLLEILDLSDNQFSGQVPPPLGKLSITLKILNLSSNHFTGRFPSEFETFCYSYRFLNNSGLCADISILNIPLCNSRKKSSVIVVITLEVSLVALLVLILLILRVYKTRRKQKSDTSWKLISFQRLNFTEKDIVSSMTDENVIGRGGFGTVYRVAVEGFGHVAVKKISNNISAKEIKNTFEAEVKILGNIRHRNILKILCCISNKNTLLLVCEYLENHSLDRWLNKKNRLNHTFVLDWPKRLQIAIGAAHGLAYMHQFQYAQTVKITKKIDVYSFGVVLLVLTTGKEANRGDEYSSLAQWARRHVQLGENVEEVLDEEIKEARFLDEMCRVFILGLMCTTIKPASRPSMNEVLSILLRCKDPS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2680 770 Gene3D Ribonuclease Inhibitor 37 144 IPR032675 -
Mibi01g2680 770 SUPERFAMILY L domain-like 212 453 - -
Mibi01g2680 770 Gene3D Ribonuclease Inhibitor 145 210 IPR032675 -
Mibi01g2680 770 ProSiteProfiles Leucine-rich repeat profile. 386 409 IPR001611 GO:0005515
Mibi01g2680 770 Gene3D Ribonuclease Inhibitor 211 477 IPR032675 -
Mibi01g2680 770 Gene3D Transferase(Phosphotransferase) domain 1 669 769 - -
Mibi01g2680 770 Pfam Protein kinase domain 546 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2680 770 SMART LRR_typ_2 408 432 IPR003591 -
Mibi01g2680 770 SMART LRR_typ_2 97 121 IPR003591 -
Mibi01g2680 770 SMART LRR_typ_2 193 218 IPR003591 -
Mibi01g2680 770 SMART LRR_typ_2 145 169 IPR003591 -
Mibi01g2680 770 SMART LRR_typ_2 243 267 IPR003591 -
Mibi01g2680 770 Pfam Leucine Rich Repeat 436 455 IPR001611 GO:0005515
Mibi01g2680 770 SUPERFAMILY Protein kinase-like (PK-like) 542 765 IPR011009 -
Mibi01g2680 770 SUPERFAMILY L domain-like 46 289 - -
Mibi01g2680 770 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 66 314 - -
Mibi01g2680 770 ProSitePatterns Protein kinases ATP-binding region signature. 550 573 IPR017441 GO:0005524
Mibi01g2680 770 Gene3D Transferase(Phosphotransferase) domain 1 531 668 - -
Mibi01g2680 770 Pfam Leucine rich repeat 361 421 IPR001611 GO:0005515
Mibi01g2680 770 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Mibi01g2680 770 PANTHER UNNAMED PRODUCT 91 695 - -
Mibi01g2680 770 ProSiteProfiles Protein kinase domain profile. 544 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2680 770 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 354 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2680 Mibi-ChrMibi01 47270390 47272940 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2680 90 763 Receptor kinase-like Gene Family AT5G25930 39.142 3.00e-150 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g2680 Pkinase 7.8e-17 CL0016