Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2677 ATGGCAACAGTAATCCAATTGCTTGCTAAAATGCCATATTACTTTTACTTCATCTTCTTCTTCTTCTTCATTGTCCTGAGATTTTCCGAGTCCAAGTCTCTGTATGATCAAGAACACGAAGTCCTACTCAACATAAAACAGTACCTTGATCCATTCCACAATCAGTGGGACACATCCATTGCCTCACATTGCTTTTGGCCTGGCATCAACTGCACCGGTAACTCAGTCACGAAACTGGAGTTGGGTAACACAAACATAAACAAAACAGTGCCTCCATTCATCTGTGACCTCAAAAATCTCACCTTTATTGACTTTCAGCAAAATAGTTTTTACGGGGAGTTTCCAAAATCTCTCTACAACTGCTCCAAGCTTGAGTACCTTGACCTCTTCATAAACAACTTTGTGGGTCCTCTTCCAAACGACATTGACCGATTGGCCAGCCTGCGTTACCTTGATCTTGGCTTCAACAGTTTCTCCGGCCACATCCCGGCGAGCATAGGAAGGTTGAAGGAACTGAGAACTCTTCAACTTCCCTGGAATAAATTTAACGGCAGTATCCCAGATGAAATAGGTGACTTGTCCAATCTTGAATTCTTACAACTGGGCCCAAACAGTAATCTACCTCCTACACAATTTCCGTTGAGCTTCACCAAGTTGAAAAAACTGAAGAGCCTTTCAATGTCATATATGAATTTGATCGGGAAGATTCCAGAAAGTATTGGAGAACTGGTGAGTTTGGAGCAGTTGCATTTATATGAGAATGGCTTAAGTGGGCAAATCCCCATAGGCTTGTTTGCTCTGAAGAATCTAAGCATATTGATTCTTCAGGGAAATAGGCTATCTGGGGAAATACCTAACGAGATTGAACCTTTGAATCTCGTTTTATTCGATGTTTCAGAAAATATTCTTACTGGGAAGATACCTAGCGGCCTTTGGATGTCCCATAGTTTGAGATATTTACTTATCAACAACAATATGTTTACCAGTGAGCTCCCTCAAAGAATTTCTTCAAATTTGGTTTTGTTACGGGCGAGTATGAATCTCTTCAATGGAAGTATTCCACAGCAGCTAACAGCTCTTCCCCATCTGGAAGAGTTGTCACTTGGTCAGAACAAGCTAATAGGGCCACTGCCATCAGAAATTATATATTGGAAGACGCTCGTGACTCTGAATTTGAGCCACAATCAACTCTCTGGGCCAATCCCAAATGCTATCAGTAGTTTACCTTTACTTGAAATTCTGGACTTGTCAGATAATCAACTCTCTGGTCAAGTTCCACCTCAACTTGGTAAATTGTCAATAACCCTCAAAAGCCTCAATCTCTCCTCCAACCATTTCACATGGAGAATTCCTAGGGAATTTGAAAATCTTGATTATTCCCACAGCTTTCTCAACAATTCTGATCTTTGTGCTGATACATCTACAATAAACCTTCCCTTGTGCAATTCTAGTTCTAGCCCCAAAAGGTTGAGCAGGAAGTCGCATGTGTCTCCTCCTTTGATCATAGTCATCACACTAGCGGTCTCCTTAGTAGCTTTGTTGGTGTTGCTCTTACTGGTCAAACTATACAAAACAAGAAAGCAAGAATCATCAGATACATCATGGAAGCTTACTTCCTTTCAAAGGTTGAATTTCACTGAAAAAGATATCGTGTCCTCGATGGCAGATGAAAATGTTATAGGGAGAGGTGGTTTTGGTACTGTATATCGTGTTGCTGTTGAAGGTTTTGGCCATGTTGCTGTGAAAAAGATACTGAATCACTTGTCAGAGCATGAGATTAAGAATGCATTCGAAGCAGAAGTTAAGATCTTGGGCAATATTCTTCACAACAATATTCTGAAGCTCTTGTGTTGTATTTCTAACAAGGATACCCTGCTACTTGTGTGTGAATATCTAGAAAACCACAGCCTTGATCGCTGGCTGAACAAGAACAGGTTAAACCATAATTATTTTCTTGATTGGCCAAAACGATTGCAGATAGCCATTGGAGCTGCACATGGTCTCGCCTATATGCACCAATTTTGAGATGAATACTCATCTCTTGCACAATGGGCAAGGCGATACGTCCAGCTTGGTGAAGATGTAGAAGAAGTTCTAGATAAAGAAATTAAGGAAGCATGCTTTGTAGATGAAATGTGTCGTGTCTTCAAACTTGGGTTATTGTGTACAGCAATGCAGCCAGCTAGTAGGCCTTCCATGAAGGAGGTGTTGTCAATACTGCTTCGTTCCAGGGACTCCACTTTAGCTATGTAG 2253 0.4101 MATVIQLLAKMPYYFYFIFFFFFIVLRFSESKSLYDQEHEVLLNIKQYLDPFHNQWDTSIASHCFWPGINCTGNSVTKLELGNTNINKTVPPFICDLKNLTFIDFQQNSFYGEFPKSLYNCSKLEYLDLFINNFVGPLPNDIDRLASLRYLDLGFNSFSGHIPASIGRLKELRTLQLPWNKFNGSIPDEIGDLSNLEFLQLGPNSNLPPTQFPLSFTKLKKLKSLSMSYMNLIGKIPESIGELVSLEQLHLYENGLSGQIPIGLFALKNLSILILQGNRLSGEIPNEIEPLNLVLFDVSENILTGKIPSGLWMSHSLRYLLINNNMFTSELPQRISSNLVLLRASMNLFNGSIPQQLTALPHLEELSLGQNKLIGPLPSEIIYWKTLVTLNLSHNQLSGPIPNAISSLPLLEILDLSDNQLSGQVPPQLGKLSITLKSLNLSSNHFTWRIPREFENLDYSHSFLNNSDLCADTSTINLPLCNSSSSPKRLSRKSHVSPPLIIVITLAVSLVALLVLLLLVKLYKTRKQESSDTSWKLTSFQRLNFTEKDIVSSMADENVIGRGGFGTVYRVAVEGFGHVAVKKILNHLSEHEIKNAFEAEVKILGNILHNNILKLLCCISNKDTLLLVCEYLENHSLDRWLNKNRLNHNYFLDWPKRLQIAIGAAHGLAYMHQFXDEYSSLAQWARRYVQLGEDVEEVLDKEIKEACFVDEMCRVFKLGLLCTAMQPASRPSMKEVLSILLRSRDSTLAM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2677 750 Gene3D Transferase(Phosphotransferase) domain 1 539 676 - -
Mibi01g2677 750 Gene3D Transferase(Phosphotransferase) domain 1 677 748 - -
Mibi01g2677 750 Gene3D Ribonuclease Inhibitor 209 482 IPR032675 -
Mibi01g2677 750 ProSiteProfiles Protein kinase domain profile. 554 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2677 750 PRINTS Leucine-rich repeat signature 408 421 - -
Mibi01g2677 750 PRINTS Leucine-rich repeat signature 387 400 - -
Mibi01g2677 750 SUPERFAMILY Protein kinase-like (PK-like) 555 742 IPR011009 -
Mibi01g2677 750 ProSitePatterns Protein kinases ATP-binding region signature. 560 583 IPR017441 GO:0005524
Mibi01g2677 750 Pfam Leucine Rich Repeat 436 457 IPR001611 GO:0005515
Mibi01g2677 750 Pfam Leucine Rich Repeat 147 168 IPR001611 GO:0005515
Mibi01g2677 750 Pfam Leucine rich repeat 361 421 IPR001611 GO:0005515
Mibi01g2677 750 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 193 - -
Mibi01g2677 750 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 78 673 - -
Mibi01g2677 750 Pfam Protein kinase domain 556 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2677 750 SUPERFAMILY L domain-like 75 453 - -
Mibi01g2677 750 SMART LRR_typ_2 408 432 IPR003591 -
Mibi01g2677 750 SMART LRR_typ_2 360 384 IPR003591 -
Mibi01g2677 750 SMART LRR_typ_2 145 169 IPR003591 -
Mibi01g2677 750 SMART LRR_typ_2 243 267 IPR003591 -
Mibi01g2677 750 Gene3D Ribonuclease Inhibitor 35 208 IPR032675 -
Mibi01g2677 750 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 204 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2677 Mibi-ChrMibi01 47227744 47230329 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2677 676 740 Receptor kinase-like Gene Family AT5G25930 49.231 1.63e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g2677 Pkinase 6.4e-16 CL0016