Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2675 ATGGCAACAGTAATCCAAGTGCTTGCTAAAATGCCATATTGCTTTCACTTCATTTTCTTCTTCTTCTTCATTGTCCTGAGATTTTCTGAGTCCAAGTCTCTGTATGATCAAGAACACGCAGTCCTACTGAAAATAAAACAGTACCTTGATCCATACCTCAATCAGTGGGATCCATCCATTGCCTCACATTGTTCTTGGCCTGGCATCAACTGCACCGCTAACTCAGTCACGAAACTACATTTGAGTGACACAAACATCACCAAAACAGTACCTCCATTCATCTGTAACCTCAAAAATCTCACCTTTATTGATTTTCAGATAAGTAGTTTTTCTGGGGAGTTCCCAAAATCTCTCTACAAATGCTCCAAGCTCAAGCATCTTGACCTCTCCATGAACAACTTTTCGGGTCCTCTTCCAAACGACATTGACCGATTGGCCAACCTGCGTTACCTTAATCTTGGCTACAACAATTTCTTCGGCAACATCCCGGCGAGCATGGGAAGGTTGAAGGAGCTGAGAAATCTCCAACTTTATTCGTGTGGATTTAACGGCAGTATCCCAGATGAAATAGGAGACTTGTCCAATCTTGAATTCTTAGACCTGAGTTCAAACACGGATCTCACTCCTGCACAGTTGCCGGCAAGCTTCACCAAGTTGAAGAAAGTGAAGAACTTGTGGATGTCCTCTATGAATTTGATTGGGAAAATTCCAGAAAGTATTGGAGAGCTGGTGAGTTTGGAAGAATTGGATTTATCAGATAATAACTTAAGTGGGAGAATCCCCAGTGGCTTGTTTGCTCTGAAGAATCATAGCATATTGCACCTTTCGACAAATAGGCTATCCGGGGAAATACCTACAGAAATTGAAGCTTTGAATCTCGTTGAATTCGATGTTTCAGATAATATTCTTACTGGGAAAATACCTAGCGGCCTTTGGACGTCCCATAATTTGACATCTTTACTTATCAGCAACAACAAGTTCACCGGTGAGCTCCCTCAAAGATTTCCTTCAAATTTGGTCGAGTTATTGGCGAGTAATAATCTCTTCAATGGAAGTATTCCACAGCAGCTAACGGCTCTTCCCCATCTGGAAAAGTTGTCGCTTGATCAGAACAAGCTAATAGGGCCACTGCCATCAGAAATCATAAATTGGAAGTCGCTCGCGATTCTAGATTTGAACCACAACCAACTCTCTGGTCAAATTCCACCTCAACTTGGTAAATTGTCAACACTCTCAAGCCTCAATCTCTCCTCCAATCATTTCACAGGGAGGGTTCCTAGTGAATTTGAAACTATTTTTTATTCCGACAGCTTTCTCAACAATTTTGGTCTTTGTGCTGAAATATCTATACTAAACATTCCCTTGTGCAATTCTAGAAAGAAGTCATCAGTGATCGTAGTCATCGCCCTAGTGGTCTCCTTAGTAGCTTTGTTGGTGTTGATCTTATTAATTCTCATAGTATACAAAACAAGAAGAAAGCAAAAATCAGAAACTTCATGGAAGCTTATTTCCTTTCAAAAGTTGAATTTCACCGAAAACGATATCGTGTCCTCGATGACAAATGAAAATGTTATAGGGAGAGGTGGTTTTGGTACTGTATATCGTGTTGCTGTTGAAGGTTTTGGCTATATTGCTGTGAAAAAGATATCGAATCACATGTCAGAGCATGAGATTAAGAATGCATTCGAACCAGAAGTTAAGATCTTGGGCAGTATGCGTCACAAAAATATTCTGAAGCTCTTGTGTTGTATTTTTAACAAGAATACTTTGCTACTTGTGACTGACTATCTGGAAAACCATAGCCTTGATCACTGGTTGAACAAGAAGAACATGTTAAACCATAATTTTGTTCTTGATTGGCCAAAAAGATTGCATATAGCCATTGGAACTGCACATGACTTTGGTCTAGCTAGGATGTTGACTAAGCCCAATGAACTCACTATGTCAAATGTGGCTGGATCATTCGGCTACATTGCTCCAGATTGGGCAAGGCGATACGTCCAGTTTAGTGAAGGTGTAGAAGAAGTTCTGGATAAAGAAATTAAGGAAGCATGCTTTGTAGATGAAATGTGTCATGTCTTCAAACTTGGGTTGATGTGTACAGCAGTGCAACCAGCTATTAGGCCTTCCATGAAGGAGGTGTTGTCAATACTGCTTTGTTGCAGGGACTTAATTTTAGCTATGTAG 2187 0.4037 MATVIQVLAKMPYCFHFIFFFFFIVLRFSESKSLYDQEHAVLLKIKQYLDPYLNQWDPSIASHCSWPGINCTANSVTKLHLSDTNITKTVPPFICNLKNLTFIDFQISSFSGEFPKSLYKCSKLKHLDLSMNNFSGPLPNDIDRLANLRYLNLGYNNFFGNIPASMGRLKELRNLQLYSCGFNGSIPDEIGDLSNLEFLDLSSNTDLTPAQLPASFTKLKKVKNLWMSSMNLIGKIPESIGELVSLEELDLSDNNLSGRIPSGLFALKNHSILHLSTNRLSGEIPTEIEALNLVEFDVSDNILTGKIPSGLWTSHNLTSLLISNNKFTGELPQRFPSNLVELLASNNLFNGSIPQQLTALPHLEKLSLDQNKLIGPLPSEIINWKSLAILDLNHNQLSGQIPPQLGKLSTLSSLNLSSNHFTGRVPSEFETIFYSDSFLNNFGLCAEISILNIPLCNSRKKSSVIVVIALVVSLVALLVLILLILIVYKTRRKQKSETSWKLISFQKLNFTENDIVSSMTNENVIGRGGFGTVYRVAVEGFGYIAVKKISNHMSEHEIKNAFEPEVKILGSMRHKNILKLLCCIFNKNTLLLVTDYLENHSLDHWLNKKNMLNHNFVLDWPKRLHIAIGTAHDFGLARMLTKPNELTMSNVAGSFGYIAPDWARRYVQFSEGVEEVLDKEIKEACFVDEMCHVFKLGLMCTAVQPAIRPSMKEVLSILLCCRDLILAM 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2675 728 ProSiteProfiles Leucine-rich repeat profile. 245 268 IPR001611 GO:0005515
Mibi01g2675 728 SUPERFAMILY L domain-like 55 287 - -
Mibi01g2675 728 SUPERFAMILY L domain-like 212 432 - -
Mibi01g2675 728 Gene3D Ribonuclease Inhibitor 211 452 IPR032675 -
Mibi01g2675 728 ProSiteProfiles Protein kinase domain profile. 519 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2675 728 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 193 - -
Mibi01g2675 728 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 206 460 - -
Mibi01g2675 728 Gene3D Transferase(Phosphotransferase) domain 1 502 637 - -
Mibi01g2675 728 SUPERFAMILY Protein kinase-like (PK-like) 508 718 IPR011009 -
Mibi01g2675 728 Pfam Leucine rich repeat N-terminal domain 37 71 IPR013210 -
Mibi01g2675 728 Pfam Leucine Rich Repeat 245 264 IPR001611 GO:0005515
Mibi01g2675 728 SMART LRR_typ_2 385 408 IPR003591 -
Mibi01g2675 728 SMART LRR_typ_2 145 169 IPR003591 -
Mibi01g2675 728 SMART LRR_typ_2 360 384 IPR003591 -
Mibi01g2675 728 SMART LRR_typ_2 243 267 IPR003591 -
Mibi01g2675 728 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Mibi01g2675 728 Pfam Leucine rich repeat 115 158 IPR001611 GO:0005515
Mibi01g2675 728 Gene3D Ribonuclease Inhibitor 37 143 IPR032675 -
Mibi01g2675 728 Pfam Protein kinase domain 521 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2675 728 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 718 - -
Mibi01g2675 728 Gene3D Ribonuclease Inhibitor 144 210 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2675 Mibi-ChrMibi01 47221090 47223571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2675 79 718 Receptor kinase-like Gene Family AT5G25930 35.364 6.07e-129 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g2675 Pkinase 5.7e-14 CL0016