Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2672 ATGGGAAGAGCAACGAGGTGGTTGAAAGGGTTATTTGGTGTGAAGAAAGACAGAGACAAAAAACAAAATTCAAACTTGAAATCTACGATGGCGCCGCCGCCACCACCACCACCAAATCATCTTTTACCTTCAGAGGCTGCTTGGCTTCAATCATTCTATGGAGAAACAGAAGACCAACAGAACAAGCACGCCATTGCGGTGGCCGCAGCCACCGCAGCAGCTGCCGACGCCGCCGTCGCCGCCGCCCAGGCGGCGGTGGCCGTCGTGAGACTGACCAATAGTCACAACAGAACTGCCATGTTCGGCCGTGGACACGAGAAATTGGCCGCCGTCAAGATTCAAACAGTGTTTAGGGGATTCTTGGCAAGGAAGGCATTAAGAGCATTGAAAGGATTAGTGAAGATTCAAGCACTTGTGAGAGGATTTCTAGTTCGAAAGCAAGCAACTGCAACACTATACAGCATGCAAGCTCTTATAAGAGCTCAAGCCACAGTTCGATCTCACAAAGCTCGTCAATTCACGAACAAAACCGAAGAATCATACAAATTCGAAACTCAACTTCAAAGATCCACGGAGAGATTCGATGAAAGTAGGAGGTTTTCTTCTTCTTTTGACGCCTCCATGAATAACAACACTAACAGTACAGATGGAAGTCCGACACCGAAGATAGTGGAAATGGACACAGGAGGCTGCAGGCCAAAGTCAAGGTCTCGCCGAAGCAACACATCAATGTCGGATTTTGGCGACGACCCATTATTCCAAACACTGTCTTCTCCAAGCCCAGTTCCTCAAATTCGAACCCCAGCTCGGATTTCAACGGTGGTAGATCGGAGGGTTTTGCCTGAAACAGAGTGGGGACTAGCAGGGGAAGAATGTAAGTACTCTACAGCACATAGCACTCCTCGTTTCACTAATTCATGTTCTTGTGGATCACTAGCTGCCACACCCAAGAGTGTTTATGCTGAAAGGTTGGTGTGGCAATATGGGAATTATCCCAATTACATGGCCAATACTCAGTCTTCGAAGGCGAAATTGAGATCTAGGAGTGCTCCGAAGCAGAGGCCGGAATCTGGTGGCGGAGCTAAGAAGAGGCTTTCGTTGAATGAAATGATGGAGTCTAGGAGTAGTTTGAGTGGGGTTAGGATGCAGAGGACATGTTCAAAAGTTCAGGAAGCCATTAATTTCAAGAATGCTGTGATGGGGAAAATTGAGAAATCTGGGGAGATTGGGAGAGATAGTTACTGCTTGCAGAGGAGGTGGTATGGTGATTGA 1272 0.4764 MGRATRWLKGLFGVKKDRDKKQNSNLKSTMAPPPPPPPNHLLPSEAAWLQSFYGETEDQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTNSHNRTAMFGRGHEKLAAVKIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLYSMQALIRAQATVRSHKARQFTNKTEESYKFETQLQRSTERFDESRRFSSSFDASMNNNTNSTDGSPTPKIVEMDTGGCRPKSRSRRSNTSMSDFGDDPLFQTLSSPSPVPQIRTPARISTVVDRRVLPETEWGLAGEECKYSTAHSTPRFTNSCSCGSLAATPKSVYAERLVWQYGNYPNYMANTQSSKAKLRSRSAPKQRPESGGGAKKRLSLNEMMESRSSLSGVRMQRTCSKVQEAINFKNAVMGKIEKSGEIGRDSYCLQRRWYGD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2672 423 MobiDBLite consensus disorder prediction 11 39 - -
Mibi01g2672 423 MobiDBLite consensus disorder prediction 340 365 - -
Mibi01g2672 423 MobiDBLite consensus disorder prediction 184 200 - -
Mibi01g2672 423 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
Mibi01g2672 423 MobiDBLite consensus disorder prediction 184 267 - -
Mibi01g2672 423 MobiDBLite consensus disorder prediction 201 221 - -
Mibi01g2672 423 Gene3D - 104 152 - -
Mibi01g2672 423 ProSiteProfiles IQ motif profile. 154 182 IPR000048 GO:0005515
Mibi01g2672 423 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Mibi01g2672 423 Pfam IQ calmodulin-binding motif 133 147 IPR000048 GO:0005515
Mibi01g2672 423 MobiDBLite consensus disorder prediction 235 267 - -
Mibi01g2672 423 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Mibi01g2672 423 SMART iq_5 128 149 IPR000048 GO:0005515
Mibi01g2672 423 SMART iq_5 105 127 IPR000048 GO:0005515
Mibi01g2672 423 Pfam Protein of unknown function (DUF4005) 300 388 IPR025064 -
Mibi01g2672 423 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2672 Mibi-ChrMibi01 47153281 47154748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2672 1 382 IQD Protein Family AT3G16490 47.342 1.55e-79 249