Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2671 ATGTCCAATTCTCGTTCCATTTACTTCACTCTTGTTCTTCTTTTTCTTCTGCAGAATCCTTCTGCAACATTGTGCCATACCAAGGGACTCCGACCCGGAAGGCATAATTCGGGTTTCGGGTTGTCCATAAACAGGACCCAAATCCAGAATTCGGAGCAGCAATTCTTGAAATGGGTTAACTTTGTTGGTAGCCTCAAGCATTCTGTGTTTAAGACTGCAAAAAACAAGCTTTTCCCTTCTTACACACTTCACGTTTCTAAGAATCCTGCCATAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTAACATCAATCTCGTGAGAGTGATCATTAAAGTTCATGCAGGTGTTTACACTGAGAAAGTGAACATCCCTCCTATGAAATCCTTCATAACCATAGAAGGAGCAGGAGCAGACAACACAATAGTTCAATGGGGTGACACAGCACAAACACCAGGTCCTAGAGGACAGCCATTAGGAACATATGGTTCTGCAACATTTGGTGTGAACTCACAATACTTCATAGCCAAGAACATAACATTCAAAAACACAACCCCAGCTCCTGCACCAGGAGCAGTAGGGAAGCAAGCAGTGGCATTAAGAATATCAGCAGACACAGCATCATTCTACGGATGCAAATTCCTAGGAGCACAAGACACATTGTATGACCATGTGGGTAGGCATTACTACAAGGATTGTTACATCGAAGGCTCAATTGATTTCATATTTGGAAACGCCCTGTCATTATTTGAGGGGTGTCACGTGCATGCAATAGCACAGAAATTAGGGGCATTGACAGCACAAGGAAGGAGCAGCATGTTGGAGGATACAGGGTTCTCATTTGTAAACTGTAAGGTCACGGGTTCAGGAGCACTATACCTTGGAAGGGCATGGGGTCCTTTTTCTCGTGTGGTTTTTGCTTACACTTACATGGACGACATCATCATTCCCAAGGGCTGGTATAATTGGGGTGACCCTAATCGTGAAATGACAGTATTTTATGGACAGTACAAGTGTACAGGACCTGGAGCTAGCTTCGCGGGCAGGGTATCATGGTGTAGAGAACTCTCCGATGAGGAAGCTCAGCCTTTTATTTCACTTAGCTTCATTGATGGTGATGAGTGGACCAAATTGTAA 1146 0.438 MSNSRSIYFTLVLLFLLQNPSATLCHTKGLRPGRHNSGFGLSINRTQIQNSEQQFLKWVNFVGSLKHSVFKTAKNKLFPSYTLHVSKNPAIADFATIQEAIDSLPNINLVRVIIKVHAGVYTEKVNIPPMKSFITIEGAGADNTIVQWGDTAQTPGPRGQPLGTYGSATFGVNSQYFIAKNITFKNTTPAPAPGAVGKQAVALRISADTASFYGCKFLGAQDTLYDHVGRHYYKDCYIEGSIDFIFGNALSLFEGCHVHAIAQKLGALTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDDIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWCRELSDEEAQPFISLSFIDGDEWTKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2671 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 379 - -
Mibi01g2671 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Mibi01g2671 381 Pfam Pectinesterase 92 376 IPR000070 GO:0030599|GO:0042545
Mibi01g2671 381 FunFam Pectinesterase 79 381 - -
Mibi01g2671 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
Mibi01g2671 381 Gene3D - 79 381 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2671 Mibi-ChrMibi01 47107656 47112979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2671 1 378 Carbohydrate Esterase AT5G47500 44.327 2.83e-105 313