Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2665 ATGCCTCAACAATCCTTTGTTGAGGCTCCAAAATCATCTCGAAGAAGATGGACATTGCTGGCAAAGGAGGCAAAGGAGTGGACGTTGCCGGAGGCGGAGGCTAAGGAATGGCTAGTGAGGATATTCGATCTCAGCCGTCGGTTCATCGTGCTGCCATTAGCTCAGTTTCCTGCCAAGATGTCTGAGCTGCTAGACAACGACACTCTTGAAAGGGCTAAGCCTCCTCCCACTGAACAGGATATTTCTGATGAGTTAGATATGAAAATAAAGAAGTACCTGAGAGGAGAAGCTGCGAATTTGGAGGTTTTAAGAGACAAAAAATTGAAGGGTCAACTTTCTGTTAGAGAAGATTTATATAGTAAATCTGCCAAAGTTGCCGCCAAGGCGGATAAGTGGCTTGTGCCCAGTGAGGGAGGTTATCTAGAGGCTGAAGGCATAGAGAAGACATGGAGCATCAAACAAGAGACAATAGCTAAAGAAGTAGATATCTTAAGCTCAAGAAACCAATATGATATTATTTTACCAGAATTTGGTCCGTACACTTTGCAATTTACGCCAAGTGGCCGATATATGGCTATTGGAGGGCGTAAGGGTCATTTGGGAATTTTGGACTTGATGAGTATGAACTTAATCAGAGAGTTTCAGGTTAGAGAAACAGTCCGTGATGTAACATTCTTGCATAATGAGCTGTTTCTTGCTGCTGCTCAGAAAAAGTATCTTTACATCTATGACCGCGCTGGCACTGAGCTTCACTGCCTTAAGGAACATGGTTCTGTGTTAAGGCTTCAGTTTCTACAAAACCACTTCCTTTTGGCTTCAATAAACAAGTTTGGGCAACTGCATTATCAGGACGTTACAATGGGTGCAATGGTTGGTAATATTCGAACTGGGTTAGGTCGTACTGATGTGATGCAAGTGAATCCCTTCAATGGGGTTGTTGCTTTGGGCCATTCAAGCGGTACAGTCACAATGTGGAAGCCAACTAGCTCAGCTCCTCTTGTCAAGATGTTGTGTCATCATGGACCTGTCTCAGCTCTGGCTTTTCACTCAAATGGCCACTTAATGGCCACAGCTGGAAAGGACAAAAAAATAAAGCTTTGGGATTTGAGGAAATTTGAGGTCTTCCAGACACTACATGGCCATGCCAACACCTTGGATTTTAGTCAGAAAGGATTACTTGCATGTGGTACTGGATCTTCTATACAGGTTTTTGGTGATCTTTCTGGTTCTCAGAATTATTCGAGGTATATGACTCATTCCATGGTTAAAGGTTACCAAGTAGGAAAGCTAATGTTTCGACCCTACGAAGATGTTCTAGGCATAGGGCATTCCATGGGTTGGTCCAGCATTCTTATTCCAGGATCGGGAGAACCTAACTTTGATTCGTGGGTGGCTAATCCATTTGAAACATCTAAACAGAGGAGAGAGAAAGAAGTTCGCTCACTGTTGGATAAGCTGCCGCCTGAGACGATTATGTTGGACCCAAAAAAAATTGGTACAGTGAAGCCTACACATAAAGTGATGACTAAGAAGGAGAGGGAGGCAGATATAGAAGCTGCCGTTGAAGCTGCCAAGGACATTAAAATGAAGAAAAAAACTAAAGGAAGAAGTAAAGCAAGCAAAGTGGTGAAGAAAAAGAAGGAAGCAATTGAGAAAGTGAAGAGGCCTTTCTTGGAAGATAAACTTAAGGAGGAAGCAATTTCCAGAAAGAAACAAAGAATCCGCGAGGAAGTTAGTTTACCAAAATCTTTAAAGAGGTTTGCTGGTAGAAAACCAGCAACATGA 1785 0.4275 MPQQSFVEAPKSSRRRWTLLAKEAKEWTLPEAEAKEWLVRIFDLSRRFIVLPLAQFPAKMSELLDNDTLERAKPPPTEQDISDELDMKIKKYLRGEAANLEVLRDKKLKGQLSVREDLYSKSAKVAAKADKWLVPSEGGYLEAEGIEKTWSIKQETIAKEVDILSSRNQYDIILPEFGPYTLQFTPSGRYMAIGGRKGHLGILDLMSMNLIREFQVRETVRDVTFLHNELFLAAAQKKYLYIYDRAGTELHCLKEHGSVLRLQFLQNHFLLASINKFGQLHYQDVTMGAMVGNIRTGLGRTDVMQVNPFNGVVALGHSSGTVTMWKPTSSAPLVKMLCHHGPVSALAFHSNGHLMATAGKDKKIKLWDLRKFEVFQTLHGHANTLDFSQKGLLACGTGSSIQVFGDLSGSQNYSRYMTHSMVKGYQVGKLMFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLDPKKIGTVKPTHKVMTKKEREADIEAAVEAAKDIKMKKKTKGRSKASKVVKKKKEAIEKVKRPFLEDKLKEEAISRKKQRIREEVSLPKSLKRFAGRKPAT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2665 594 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 336 370 - -
Mibi01g2665 594 MobiDBLite consensus disorder prediction 569 584 - -
Mibi01g2665 594 Gene3D - 148 300 IPR015943 GO:0005515
Mibi01g2665 594 FunFam Os01g0183100 protein 245 439 - -
Mibi01g2665 594 SUPERFAMILY WD40 repeat-like 178 409 IPR036322 GO:0005515
Mibi01g2665 594 MobiDBLite consensus disorder prediction 569 594 - -
Mibi01g2665 594 SMART WD40_4 290 326 IPR001680 GO:0005515
Mibi01g2665 594 SMART WD40_4 371 405 IPR001680 GO:0005515
Mibi01g2665 594 SMART WD40_4 207 244 IPR001680 GO:0005515
Mibi01g2665 594 SMART WD40_4 165 204 IPR001680 GO:0005515
Mibi01g2665 594 SMART WD40_4 329 368 IPR001680 GO:0005515
Mibi01g2665 594 Pfam BING4CT (NUC141) domain 416 494 IPR012952 -
Mibi01g2665 594 Pfam WD domain, G-beta repeat 337 368 IPR001680 GO:0005515
Mibi01g2665 594 ProSitePatterns Trp-Asp (WD) repeats signature. 355 369 IPR019775 -
Mibi01g2665 594 PANTHER WD-REPEAT PROTEIN BING4 68 588 IPR040315 -
Mibi01g2665 594 SMART BING4CT_2 415 495 IPR012952 -
Mibi01g2665 594 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 377 IPR001680 GO:0005515
Mibi01g2665 594 Gene3D - 301 420 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2665 178 404 U-box Gene Family AT1G04510 25.311 3.49e-13 70.5