LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi01g2658	ATGGAGAAAACCCTTGTTCTATCTTTTCTCTTCCTTCTCTTCCATTTGGCTCCAACAAAAGCTGATCTTGGCATAGGTGTAGGTATCGGTATCGGTATCGGCATAGGAAATGGCGGTGGGGGTGGCAATGGCGGCCGAGGTGGTGGTGGTGGTGGGGCTAATAATGGCCCAAGCCCATCAAAGATTGATGTAGCTTACAAAAGTCTCCAAGCATGGAAATCAGCCATCACTAATGACCCATTAAAGATTCTTGATACTTGGATAGGTCCCAACGTTTGTTCTTATAAAGGAGTGTTTTGTTTTAATCCAGATGATCAGGATCATCAAACTGGTCCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTTCAAGGGACTCTTGTTAAAGACCTATCTTTACTCACTGATATGTCTCTTTTTCACCTTAACAGCAATAGATTCACTGGTACAATTCCTGACACATTCAAAGACCTTTCATCTCTTGAAGAATTAGACCTTAGTAACAACCAATTCTCAGGCAAATTCCCCACTGTTATTTTGAACATGCCTAGTCTTATTTACTTAGACCTCAGATTCAACTCTTTCTCTGGGACCCTCCCAGATGAACTTTTCAGTAAAAATAATCTTGATGCAATACTTCTCAACAATAACCAATTTCAAGGCCAAATCCCACAGAATCTGGCTAGTTCCTCTGCTTCTGTGATCAACCTAGCTAACAATAAGTTCACTGGAAACATCCCAATTTCAAGTTTAGGTTTGGTGGGTTATAATTCTAAGCTGAAGGAGATTCTGCTCCTGAATAATCAATTAACAGGTTGTGTTCCCCAAGGAGTGGGATTGTTCAGAGACGTGCAAGTTCTTGATGTGAGCTTTAATTCACTGGTGGGCCAATTGCCAGAGACATTATCTTGCTTACAAGATATTGAAGTTCTTAACTTGGCTCATAATCAGCTTTCTGGGGAATTATCAGATGTGGTATGCTCCTTGAAGAGTTTGGTGAATTTAACTGTGGCTTATAACTTTTTCAACAGTTTAAGTCAGGAATGTTCGAGGCTTCTAATTAGGAACGTGGGGTTTGATTTCTCGGACAATTGTATTCCTGGGAGGGACATGCAGAGACCTAAACCAGAATGTTCTGTTATCCCAGGTGGTAGCTTAAGTTGTCTGAGAATCCCCATACCAAAGCCTCTTGATTGTGCTTCACTGGCCATAGTTTCTTCTTCATCTTCCCCTTGA	1239	0.4116	MEKTLVLSFLFLLFHLAPTKADLGIGVGIGIGIGIGNGGGGGNGGRGGGGGGANNGPSPSKIDVAYKSLQAWKSAITNDPLKILDTWIGPNVCSYKGVFCFNPDDQDHQTGPFVAGIDLNHANLQGTLVKDLSLLTDMSLFHLNSNRFTGTIPDTFKDLSSLEELDLSNNQFSGKFPTVILNMPSLIYLDLRFNSFSGTLPDELFSKNNLDAILLNNNQFQGQIPQNLASSSASVINLANNKFTGNIPISSLGLVGYNSKLKEILLLNNQLTGCVPQGVGLFRDVQVLDVSFNSLVGQLPETLSCLQDIEVLNLAHNQLSGELSDVVCSLKSLVNLTVAYNFFNSLSQECSRLLIRNVGFDFSDNCIPGRDMQRPKPECSVIPGGSLSCLRIPIPKPLDCASLAIVSSSSSP	412

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi01g2658	412	Gene3D	Ribonuclease Inhibitor	65	232	IPR032675	-
	Mibi01g2658	412	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	61	393	-	-
	Mibi01g2658	412	Pfam	Leucine rich repeat N-terminal domain	67	100	IPR013210	-
	Mibi01g2658	412	SUPERFAMILY	L domain-like	80	367	-	-
	Mibi01g2658	412	Gene3D	Ribonuclease Inhibitor	233	370	IPR032675	-
	Mibi01g2658	412	PRINTS	Leucine-rich repeat signature	162	175	-	-
	Mibi01g2658	412	PRINTS	Leucine-rich repeat signature	306	319	-	-
	Mibi01g2658	412	Pfam	Leucine rich repeat	141	195	IPR001611	GO:0005515
	Mibi01g2658	412	FunFam	Leucine-rich repeat extensin-like protein 1	66	230	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi01g2658	Mibi-ChrMibi01	46620803	46622041	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi01g2658	61	391	Leucine-rich Repeat extension Gene Families	AT3G24480	50.296	3.06e-104	315