Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2657 ATGAAGATCGAGCAGATAGACGATGTTGTGGATTCGAACAGCTGTCGGAGCTTAGGGAATTACGAGAGGCAGATTGTGAGTGTTGATGCAAAGAGGGTTCTGGTTGGAGCAGGTGCCCGGATCTTGTTTTATCCGACACTTTTGTATAATGTGCTTCGAAACAAAATTGAAACAGAGTTCCGGTGGTGGGATGAAGTCGATGAGTTTCTATTATTGGGAGCTGTACCGTTCCCCAAAGATGTCCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTAAACGAACCTTATGAGACCTTGGTGCCTTCATCACTATATCTTACACATGGGATTGATCATTTGGTTATCCCTACAAGGGATTATCTCTTTGCCCCTTCATTTTCTGATATAAGTCGAGCTGTGCAATTCATTCATCAGAACGCAACGTGTGGCAAGACTACATATGTTCACTGTAAAGCTGGGAGGGGCAGGAGTACAACAATTGTCCTTTGCTATTTGGTTGAATACAAGCATATGACACCTATTGCTGCCCTTGAATATGTACGGTCAAGACGACCTAGAGTTTTATTAGCACCCTCGCAGTGGAAGGCTGTTCAAAATTATAGCAAGCGTAGACCTTGTCCTAGGCCACACTCTCCACCAGGTGATGCTGTTCTTATAACCAAAGCTGATCTTGAGGGTTACCATAACACATTTGATGCTGGTATGGAGTTGGCCATTGTTCCCAAAGGGCCAAAGACAAAGTCGAAGCCCATGATTTCGAAGCTATCTTGCCTGTTCGCATCATTAAAAGTTTCTGGTTATAGCATACCAGTGACCCGGCGGCTGCCTGTGTCCGAGGCACGTGCTTGCTAA 861 0.453 MKIEQIDDVVDSNSCRSLGNYERQIVSVDAKRVLVGAGARILFYPTLLYNVLRNKIETEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYLTHGIDHLVIPTRDYLFAPSFSDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPIAALEYVRSRRPRVLLAPSQWKAVQNYSKRRPCPRPHSPPGDAVLITKADLEGYHNTFDAGMELAIVPKGPKTKSKPMISKLSCLFASLKVSGYSIPVTRRLPVSEARAC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2657 286 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 205 IPR029021 -
Mibi01g2657 286 FunFam Dual specificity phosphatase domain protein 62 209 - -
Mibi01g2657 286 Pfam Dual specificity phosphatase, catalytic domain 102 205 IPR000340 GO:0008138|GO:0016311
Mibi01g2657 286 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 264 - -
Mibi01g2657 286 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 209 IPR020422 GO:0006470|GO:0008138
Mibi01g2657 286 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 130 198 IPR000387 GO:0016311|GO:0016791
Mibi01g2657 286 SMART dsp_5 65 206 IPR020422 GO:0006470|GO:0008138
Mibi01g2657 286 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
Mibi01g2657 286 Gene3D Protein tyrosine phosphatase superfamily 62 207 IPR029021 -
Mibi01g2657 286 CDD PTPMT1 62 206 IPR044596 GO:0004721
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2657 Mibi-ChrMibi01 46484445 46486298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2657 24 266 Protein tyrosine phosphatase (PTP) family AT2G35680 53.546 6.83e-98 289