Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2655 ATGAACAGTTTGAAGAAGAAGTGTTGTGATCCGATAGACGCCAAGCTGGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGTCCTGCTTGCGGACACAAGTTTCAAACCAAACCTGACTGGGTGGGTTTACCAGCAGGAGTTAAATTCGATCCAACAGACCAAGAACTGATTGAACACCTGGAAGCCAAAGTTGAATTCAAGCACATGAAATCTCACCCTCTCATCGATGAGTTCATCCCCACCATCGATGGAGAAGACGGAATCTGCTACACCCACCCCGAGAAACTCCCTGGAGTAACGAAGGATGGGTTGAGCAGGCACTTTTTTCACAGGCCATCAAAAGCATATACGACAGGAACAAGAAAGAGAAGGAAGATCCAGAACGAGTGTGATCAATTACAACAAGGAGGAGAAACAAGATGGCACAAAACTGGGAAAACCAGACCAGTTCTTGTTAATGGAAAGCAAAAAGGCTGCAAGAAAATCCTCGTACTGTACACCAACTTTGGTAAGAACAGAAAGCCTGAAAAGACCAACTGGGTGATGCATCAATACCATTTGGGACAACATGAAGAAGAAAAAGAAGGCGAACTTGTCGTCTCCAAAATATTCTTCCAAACACAGCCCAGACAATGCACCACCACCACCAACAATAATAATATCGTTCATACTAATAATAATTGGTCAGAGAGAAGTGCAACGACAGGCGAAGCGAGTGGAGATCAGCCGAATAGTAATAGTAGAAGAGAGAGTACAAGTGGGAGTTGTTCTTCTAAGGAAATAGTCGCTACTACTACTCATAGTAGAGATCCTCAACATATTCTTCTTCATCATCATAATGATGTCTCTACTAATGTTGCTGTTGTTGTTCCTCCTCCGCCATTAACGTCCTTCACTAATGCTTTGGATATTCATCATCAGCAACAACACCACCACCTTAAATCTGACCATTTCAGCTTCATCCCATTCAGAAGAAGCTTCGATGAGGTGGGAATGGGAGATGCTTCAAGAGGAAGAGAAATGGTGCAAGCTTCTGGTTCATCAGCAGAAGAAGTGAATCATCATCAACAGATTACAGCAAATTCTTCAGCATTTCATATAAGTAGGCCTTCAATTCCTATTTCCACCATTATCTCTCCACCTCCTCCTTCACACCACCACACCTCCATCATCCTTGATGATGTCACCAGATTAATGCTCCAAAATGATCATCATTTCCAGCAACAACATCATAAACTAGAAGGAAGGTCTGCTTCTGGCTTGGAGGAACTCATCATGGGATGCACTTCAACTAATTCCAAAGAGGAGTCAACTATCACACATTATCCACAAGAAGCTGAATGGTTGAAGTACTCTTCATATTGGCCTGAGTCTGACAATCCAGGTCATCATCATGGTTAG 1401 0.4304 MNSLKKKCCDPIDAKLEEHQLCGSKQCPACGHKFQTKPDWVGLPAGVKFDPTDQELIEHLEAKVEFKHMKSHPLIDEFIPTIDGEDGICYTHPEKLPGVTKDGLSRHFFHRPSKAYTTGTRKRRKIQNECDQLQQGGETRWHKTGKTRPVLVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCTTTTNNNNIVHTNNNWSERSATTGEASGDQPNSNSRRESTSGSCSSKEIVATTTHSRDPQHILLHHHNDVSTNVAVVVPPPPLTSFTNALDIHHQQQHHHLKSDHFSFIPFRRSFDEVGMGDASRGREMVQASGSSAEEVNHHQQITANSSAFHISRPSIPISTIISPPPPSHHHTSIILDDVTRLMLQNDHHFQQQHHKLEGRSASGLEELIMGCTSTNSKEESTITHYPQEAEWLKYSSYWPESDNPGHHHG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2655 466 FunFam NAC domain-containing protein 73 52 210 - -
Mibi01g2655 466 ProSiteProfiles NAC domain profile. 43 206 IPR003441 GO:0003677|GO:0006355
Mibi01g2655 466 SUPERFAMILY NAC domain 37 206 IPR036093 GO:0003677|GO:0006355
Mibi01g2655 466 Pfam No apical meristem (NAM) protein 44 187 IPR003441 GO:0003677|GO:0006355
Mibi01g2655 466 MobiDBLite consensus disorder prediction 214 266 - -
Mibi01g2655 466 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 319 IPR044799 GO:0003700
Mibi01g2655 466 Gene3D NAC domain 52 210 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2655 Mibi-ChrMibi01 46471412 46474797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2655 4 460 NAC Transcription Factor Family AT5G56620 48.776 2.02e-130 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g2655 NAM 1.1e-23 No_clan