Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2630 ATGGCGAGAAAATGCTCACATTGTGGGAAAATAGGACATAATTCTAGGACCTGCACATCTTTTAAAGGGACTTGTGTAAGACTTCGTCTCTTTGGTGTTCAGCTAGAAACTTCTCCTCCTCCTCCTCCTTTTTTTTCCATGAAGAAAAGCTTGAGCATGGATTCCTTACCAGCTTCTTCATCTTCATCTTCTCCGTCTTCATCATTCTCTAATTCATCAAGACTCACCATCGATGAAAACTCTGCAGAGAGATCCTCTGTTGAGTATCTATCAGACGGTCTAATAGATGCTGTAGCAGCACAAGACAGTAGAAAAGGAGTAACTTGGACAGAAGATGAACACAGAAGATTCTTGGTTGGGCTTGAGAAGTTAGGAAAAGGAGATTGGAGAGGAATCTCCAGAAATTATGTCACAACAAGAACACCTACTCAAGTAGCTAGTCATGCTCAAAAATACTTTCTTCGACTCGCTGCCGTCAATAGGAAGAGACGATCAAGCCTCTTTGACATGGTGGGCATACAGGAGGATGTTAAATCTGGAAGCTGCAATTATGAAGATGAGCAGAAGAATGATACTAGCTTGACATTAATGGGCCTAAGCTTGTTTGAAAAGGGAATTAAATATGAAGCAATAGTGCCGACGTTGCAGCATAATAATTCTCTGCTGAAGAAATCTTCTTCACCCACATCGCCTGATCTGGAGCTAAGTCTTGCAGGGCCCAAGTCCTTGTAA 732 0.4194 MARKCSHCGKIGHNSRTCTSFKGTCVRLRLFGVQLETSPPPPPFFSMKKSLSMDSLPASSSSSSPSSSFSNSSRLTIDENSAERSSVEYLSDGLIDAVAAQDSRKGVTWTEDEHRRFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAAVNRKRRSSLFDMVGIQEDVKSGSCNYEDEQKNDTSLTLMGLSLFEKGIKYEAIVPTLQHNNSLLKKSSSPTSPDLELSLAGPKSL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2630 243 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Mibi01g2630 243 SUPERFAMILY Homeodomain-like 103 156 IPR009057 -
Mibi01g2630 243 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Mibi01g2630 243 MobiDBLite consensus disorder prediction 55 75 - -
Mibi01g2630 243 ProSiteProfiles SANT domain profile. 109 157 IPR017884 -
Mibi01g2630 243 PANTHER TRANSCRIPTION FACTOR KUA1 3 188 - -
Mibi01g2630 243 SMART sant 105 155 IPR001005 -
Mibi01g2630 243 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 105 155 IPR006447 GO:0003677
Mibi01g2630 243 Gene3D - 107 159 - -
Mibi01g2630 243 MobiDBLite consensus disorder prediction 222 243 - -
Mibi01g2630 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 157 IPR017930 -
Mibi01g2630 243 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Mibi01g2630 243 FunFam transcription factor MYB1R1 107 158 - -
Mibi01g2630 243 CDD SANT 108 153 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2630 Mibi-ChrMibi01 45530859 45531909 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g2630 Myb_DNA-binding 3e-11 CL0123