Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2613 ATGGGGTTTCAAAGAAAAACTGTTTCTCAGCTTCAGGTCCTTTATAATTTTTATGAAGAGGACAAGTATCCAACACAAAGTGCAGCGGAACACTTTGCGGGTGCTTTGGGGTTGACACATAAGCAAGTCCAAGATTGGTTTGCTGAGCAAAGGAGGAGAGAGAAGAAGCAAAATGGAGTGTTAGTAACGTCATGTCTCAACAATTCCTTTTCTGCTGGTGAAGAGAACCGAGGACGAATTAAAAGGAGAAAGGTTTCTGAGGGTGCTATTGGAAGCCATCCAAAATCAAATAAGAAAACACCATTGAGAAAACATGGTATTGGAAAAGGTTTAATGACAGTATGGAGGGCTACTAATCCGGACGCTGGAGATCTTCCTATTGGCTTTGGACTTTGTGATAAGCCACCAAAAACTCCAACCAATGCTGGAAGACAAAGAACTAAACTACAGAATGGGAGAAATAAAATAAAAGAAAAGAGGAAGGCTTTCATGCAAAGAAGAGTGATGAAATATAACCAGGATGTGAGTCAGAATGAACCACAGAAGGAGAAATGTGAACTTGTTTTGGGTGGATTTATAACTGAGGAGGAATTTGATCGAACGTCATTTTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAAACAAGGCCAGATACGCATATGTGTTCTGATCATCTTGCTTCCAGTGGAGTTCTTGGTTTCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCCCCAACAACTGTTAAGATGAAGAAACCCATCTGTTCGCATCCTTGGGACTTCTCTCCAGAAACTGTCAAGAAACTGTTTAAGGCATTCCATTTTCTTTATACATATGCAACTGTTATTAATATTTGCACGTTCACTCTTGATGAGTTTGTGCAAGCTTTCCATGATAAGGACTCTATGCTACTTGGAAAGATTCATGTGGCCCTCCTTACACTTCTTCTTGCTGACATTGAAGTGGAACTTACGAGTGGATTTCTTCCTCATTTGAATAAATCATGCAATTTTCTTGCATTGATTCACTCGGTTGAAAATCTAGAATGTTCTCTTGACTTCTGGAAAAGATCTCTTAACCCCCTAACATGGATAGAAATACTGCGACAAGTTCTGGTTGCTGCTGGTTTTAGTTCGAAACAAGATCCTTTGCAAAGAGAAGCATTTAGCAAGGAATTGAATCTCCTGGTAAAGTTTGGCTTACGTGCTGGCACCTTGAAGGGCGAGTTGTTTAAAATTTTGTCATCCCAAGGAAATAATGGGTCAAAAGTATCTGAACTGGCAAAGTCACCGCAGATTATTGAATTGAACCTTGCCAGCACAACAGAGGAGCTGGAATCTTTGATATGTTCAACCCTGTCTAGTGACATTACTTTATTTGAAAAGATTTCATCATCTGCATATCGACTTCGCTTGAACTCTTTTAAGAAAGACATTGATGACATTCAGTCAGATACTGAAGACTCTGGAATAGTTGAAGTTAATGACAGTAATACATGGAGCAGTGGTGATGATTTTGAATGGGATTCAGGGAACTCCAGCTTGCAGAAATTGAAGCTGGCAAAATATTCTATAATGAAAAATAATATGCTTATGGCATGCACTGAAATTGATGAGAGCCATCCAGGTGAAGTGTGGCTGTTAGGATTGATGGAGAGTGAGTATTCAGATTTGAGCATTGAAGAAAAGTTGAATGCATTAGTGGCTCTAACTGACCTTCTCTCTTCTGCGCCCAGCATTAGGATGAAGGATTCAATGAAAGCTACTTCTTATTACAGTTCTAGCATCCAGTTACGTGGTTCTGGGGCAAAAATAAAGAGGTCAATAGTAAAGAAGCCTGGGTCATATTGGAATCAGATCGGACCAAGGCATTATGTTAAAGAAGGGCATTCATCATTGAACCCTCACTCCTATCCAGTGGATTCCTCATTATTATTGTCAAATATCTGCAGTGACAGGGAATCTTTTGAGAAGGGGGAAGAAGCAGCCACAATAGGTTTAACCACTTCACACCCCATGCAATCTGTGTTTTTGGGGGCTGACCGTAGGTACAATAGATACTGGCTTTTCTTAGGGCCTTGCAATGTGAGTGACCCTGGCCATAGGAGAGTTTACTTTGAATCTTCTGAAGATGGCCACTGGGAAGTGATTGATAATGAAGAGACTTTATGTGCCTTGTTGTCAGTTTTGGATGATAGAGGTAAGCGAGAGGCACTTCTTGTTGAATCTTTGGAGAAGCTGAAAGCCCCTCTTTGTAGAGCTATGTCCATGATGAAGGTTGACCTTACTGAAATGCGTTACTCGTTAAATTCTGGTAAATCTGATCTTGATAGGATCACTGAGGACAGCTATTCTCCAATATCTGATGTGGATAACCTGAGCCTAATTGAGTCAGCCAAAGACTCTCTACCTTCCACTGGGGCTGTGGTGATTGAAGATGGGAAGAAGGGAGCAGAACAAATGCAAAAGTGGATCCGTCTTCAAGCATATGATTTATGGATTTGGAACTCCTTTTATTTAGATCTCAATGTTGTGAAATATGGTAGAAGGTGTTATGCTGACTCTCTGGTGAGATGTGAGAGTTGTCATGATCTATTCTGGAGGGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGATTTTGATCTTGAAGAAAGATATGCGATCCACACAGCCACATGCAGGGAGAAAGAAGACAGCAACAGTTTTCCAGATCACAAAATCTTATCATCAAAGATCCAATCACTGAAAGCTGCAATTTATGCTATAGAGTCTGTTATGCCTGTAGATGCGTTGGTGGGTGCTTGGAGGAAGTCTGCTCATAAGCTTTGGATCAGACGACTCAGGCGTACTTCAACTTCAACTGAGCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAGGATTGGTTATTTCAATGCAGTTTTCCTGATAGTGTGGTTGATAAAATCATTGCTTCTTTTGCATTTATGCCCCGTACATTATCAGCTCTTGCTCTATGGTTAGTGAAGTTGGATTTCGTTGTTGCTCCCTACTTGGACAAAGTCCAGCCTGTGAATAAGCAAGTCATTTCAAAGAGGTAG 3108 0.4048 MGFQRKTVSQLQVLYNFYEEDKYPTQSAAEHFAGALGLTHKQVQDWFAEQRRREKKQNGVLVTSCLNNSFSAGEENRGRIKRRKVSEGAIGSHPKSNKKTPLRKHGIGKGLMTVWRATNPDAGDLPIGFGLCDKPPKTPTNAGRQRTKLQNGRNKIKEKRKAFMQRRVMKYNQDVSQNEPQKEKCELVLGGFITEEEFDRTSFLIDDEELEMRELQTRPDTHMCSDHLASSGVLGFSLCKDVLSKFPPTTVKMKKPICSHPWDFSPETVKKLFKAFHFLYTYATVINICTFTLDEFVQAFHDKDSMLLGKIHVALLTLLLADIEVELTSGFLPHLNKSCNFLALIHSVENLECSLDFWKRSLNPLTWIEILRQVLVAAGFSSKQDPLQREAFSKELNLLVKFGLRAGTLKGELFKILSSQGNNGSKVSELAKSPQIIELNLASTTEELESLICSTLSSDITLFEKISSSAYRLRLNSFKKDIDDIQSDTEDSGIVEVNDSNTWSSGDDFEWDSGNSSLQKLKLAKYSIMKNNMLMACTEIDESHPGEVWLLGLMESEYSDLSIEEKLNALVALTDLLSSAPSIRMKDSMKATSYYSSSIQLRGSGAKIKRSIVKKPGSYWNQIGPRHYVKEGHSSLNPHSYPVDSSLLLSNICSDRESFEKGEEAATIGLTTSHPMQSVFLGADRRYNRYWLFLGPCNVSDPGHRRVYFESSEDGHWEVIDNEETLCALLSVLDDRGKREALLVESLEKLKAPLCRAMSMMKVDLTEMRYSLNSGKSDLDRITEDSYSPISDVDNLSLIESAKDSLPSTGAVVIEDGKKGAEQMQKWIRLQAYDLWIWNSFYLDLNVVKYGRRCYADSLVRCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCREKEDSNSFPDHKILSSKIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWIRRLRRTSTSTELFQVVADFVGAINEDWLFQCSFPDSVVDKIIASFAFMPRTLSALALWLVKLDFVVAPYLDKVQPVNKQVISKR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2613 1035 CDD homeodomain 4 58 IPR001356 GO:0003677
Mibi01g2613 1035 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 677 750 IPR028941 -
Mibi01g2613 1035 ProSiteProfiles 'Homeobox' domain profile. 7 57 IPR001356 GO:0003677
Mibi01g2613 1035 ProSiteProfiles DDT domain profile. 266 325 IPR018501 -
Mibi01g2613 1035 Pfam DDT domain 267 322 IPR018501 -
Mibi01g2613 1035 Coils Coil 1028 1035 - -
Mibi01g2613 1035 MobiDBLite consensus disorder prediction 72 105 - -
Mibi01g2613 1035 Pfam Homeodomain 6 56 IPR001356 GO:0003677
Mibi01g2613 1035 SMART testlast3 266 325 IPR018501 -
Mibi01g2613 1035 Gene3D - 2 61 - -
Mibi01g2613 1035 SUPERFAMILY Homeodomain-like 5 68 IPR009057 -
Mibi01g2613 1035 MobiDBLite consensus disorder prediction 75 89 - -
Mibi01g2613 1035 PANTHER HOMEOBOX PROTEIN SIX 158 1020 - -
Mibi01g2613 1035 SMART HOX_1 2 61 IPR001356 GO:0003677
Mibi01g2613 1035 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 545 584 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2613 Mibi-ChrMibi01 44803139 44812090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2613 163 1032 Homeobox Transcription Factor Family AT1G28420 25.192 3.59e-69 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi01g2613 WSD 4.6e-13 No_clan