Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2609 ATGTCAGTTGACAGCATGCCAACAAGCAACGGTGGGGGATCTGTTGCAATGTCAATTGATAATAGCAGTGTTGGGTCCAATGATTCACATACTCACATTTTAAAACACCAAGGATTGAGAAGGCGGGCCAATGATAACAGCTCTGTTGCACACAGTGTGAACCGTAGAGGAAGAGTCACACATGCCCTGAGTGATGATGCCTTGGCTCAAGCTCTAATGGACAGCAGCTCCCCAACTGAGGGCCTTGACAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTCAATATGGGTGAGGCTTTTGCACAAGGGGCTTTTGGGAAACTATACAGAGGGACTTACAATAATGAAGATGTTGCGATCAAAATTTTGGAGAGGCCTGAAAATGATCTAGCAAAGGCTCAGTTGATGGAACAACAATTTCAGCAGGAGGTCATGATGTTGGCTACACTGAAGCATCCTAATATAGTTCGTTTTATTGGCGCATGCCGGAAGCCAAAAGTTTGGTGTATTGTAACTGAGTATGCTAAAGGTGGTTCAGTTCGACAGTTTTTAATGAAGCGCAAAAATCGATCAGTTCCCCTTAAATTGGCAGTTAAACAGGCTTTAGATGTTGCAAGGGGGATGGCATATGTTCACGGCCTTCAATTGATCCACAGGGACCTGAAGTCTGACAATCTTTTAATCTTTGGTGACAAATCAATTAAAATTGCTGACTTTGGAGTCGCTCGGATTGAGGTGCAAACAGAAGGAATGACACCTGAGACTGGAACATATCGTTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAGAAGGTGGATGTATATAGCTTTGGGATTGTTCTTTGGGAGCTCATCACTGGAATGCTTCCGTTTCAGAACATGACAGCTGTTCAAGCGGCATTTGCAGTTGTCAACAGAAATGTTCGTCCAACCCTACCTAACGATTGCTTACCCATACTCCGGGACATCATGACTAGATGCTGGGATCCCAATCCTGATGTCAGGCCACCTTTTTCACAAATCGTAGCGATGCTAGAGAATGCAGAGACTGAGATCATGACTACTGTTCGCAAGGCCAGATTTCGGTGTTGCATGACCCAACCCATGACATCTGATTGA 1131 0.4492 MSVDSMPTSNGGGSVAMSIDNSSVGSNDSHTHILKHQGLRRRANDNSSVAHSVNRRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLNMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDLAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPKVWCIVTEYAKGGSVRQFLMKRKNRSVPLKLAVKQALDVARGMAYVHGLQLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTLPNDCLPILRDIMTRCWDPNPDVRPPFSQIVAMLENAETEIMTTVRKARFRCCMTQPMTSD 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2609 376 MobiDBLite consensus disorder prediction 1 30 - -
Mibi01g2609 376 CDD STKc_MAP3K-like 102 349 - -
Mibi01g2609 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 46 352 - -
Mibi01g2609 376 Pfam Protein tyrosine and serine/threonine kinase 96 349 IPR001245 GO:0004672|GO:0006468
Mibi01g2609 376 ProSiteProfiles Protein kinase domain profile. 95 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2609 376 Gene3D Phosphorylase Kinase; domain 1 84 177 - -
Mibi01g2609 376 SUPERFAMILY Protein kinase-like (PK-like) 78 349 IPR011009 -
Mibi01g2609 376 FunFam serine/threonine-protein kinase HT1 178 371 - -
Mibi01g2609 376 Gene3D Transferase(Phosphotransferase) domain 1 178 373 - -
Mibi01g2609 376 FunFam Serine/threonine-protein kinase isoform 1 85 177 - -
Mibi01g2609 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mibi01g2609 376 SMART serkin_6 95 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2609 376 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672|GO:0006468
Mibi01g2609 376 PRINTS Tyrosine kinase catalytic domain signature 257 267 IPR001245 GO:0004672|GO:0006468
Mibi01g2609 376 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672|GO:0006468
Mibi01g2609 376 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Mibi01g2609 376 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2609 Mibi-ChrMibi01 44750436 44755321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2609 1 376 MAP Kinase Kinase Kinase AT2G24360 80.851 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi01g2609 PK_Tyr_Ser-Thr 1.3e-67 CL0016