Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2608 ATGGTAGGCCAAAACCTGGGATTCACGAATATAAGCCCTCTCAAGGTGTTTTACTTTGCCAATTGTGATGCTGAAGAAATAGTGGCACTCGAAGGCTTTTGCTATTCAGTGGTAAAAATGTTGGAAGGTGGTGCGAAATTCCCTGGTATAATAGACCTAAACAAGCATAATAATAACTATTATGATTATTCTCAAGGCTTTTACCATAAGCTTGGAGAAGGTACCAATATGTCAGTTGACAGCGTTGAAAGCATGCAAACTGACAACGGTGGGGGATCTGTTGCAATGTCAATTGATAATAGCAGTGTTGGGTCCAATAATTCGCATACTCGCATTTTAGACCACCAAGGCTTGCGAAGGCGTGCCAGTGATAATTGCTCTATTGCACCAAGTGTGAATCATAGAAAAAGGGTCACACATGCTTTGAGTGATGACGCTTTGGCTCAAGCTTTAATGGACAGCAGCTCCCCAACTGAGGGCCTTGACAATTTTGATGAGTGGACAATTGATTTGAGAAAGCTCAGTATGGGTGAGGCTTTTGCACAAGGAGCTTTTGGGAAACTATACAGAGGGACTTACAACAATGAAGATGTTGCGATCAAAATTTTGGAGAGGCCTGAAAATGATCTAGCAAAGGCTCAGTTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCCACACTAAAGCATCCTAATATAGTTCGTTTTATTGGTGCATGCCGTAAGCCAATGGTTTGGTGCATTGTAACGGAATATGCTAAAGGTGGCTCAGTCAGACAGTTTCTAATGAAGCGACAAAATCGGTCAGTTCCCCTCAAATTGGCCGTTAAACAGGCCTTGGATGTTGCAAGGGGGATGGCATATGTTCATGGCCTTCAATTGATCCACAGGGACCTGAAGTCCGACAATCTTTTAATTTTTGGTGACAAATCAATTAAAATTGCGGACTTTGGAGTTGCTCGGATTGAGGTGCAAACGGAAGGAATGACACCTGAAACTGGAACATATCGTTGGATGGCTCCAGAGATGATCCAACATAGGCCTTACACACAAAAGGTGGATGTATATAGCTTTGGTATTGTTCTTTGGGAACTCATCACTGGGATGCTTCCATTTCAGAACATGACTGCCGTACAAGCAGCATTTGCAGTTGTCAATAGAAATGTTCGTCCGACCATTCCCAACGACTGCTTACCCATTCTCCGAGACATCATGACAAGATGCTGGGATCCCAACCCTGATGTTAGGCCATCTTTTACTCAAATCATAGCTATGCTAGAGAATGCAGAGACTGAGATCATGACAACTGTTCGTAAAGCTCGTTTTCGGTGTTGCATGACGCAACCCATGACATCTGACTGA 1368 0.4342 MVGQNLGFTNISPLKVFYFANCDAEEIVALEGFCYSVVKMLEGGAKFPGIIDLNKHNNNYYDYSQGFYHKLGEGTNMSVDSVESMQTDNGGGSVAMSIDNSSVGSNNSHTRILDHQGLRRRASDNCSIAPSVNHRKRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDLAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLQLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTIPNDCLPILRDIMTRCWDPNPDVRPSFTQIIAMLENAETEIMTTVRKARFRCCMTQPMTSD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2608 455 Pfam Protein tyrosine and serine/threonine kinase 175 428 IPR001245 GO:0004672|GO:0006468
Mibi01g2608 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Mibi01g2608 455 FunFam serine/threonine-protein kinase HT1 257 450 - -
Mibi01g2608 455 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 109 431 - -
Mibi01g2608 455 SMART serkin_6 174 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2608 455 Gene3D Transferase(Phosphotransferase) domain 1 257 452 - -
Mibi01g2608 455 PRINTS Tyrosine kinase catalytic domain signature 290 308 IPR001245 GO:0004672|GO:0006468
Mibi01g2608 455 PRINTS Tyrosine kinase catalytic domain signature 355 377 IPR001245 GO:0004672|GO:0006468
Mibi01g2608 455 PRINTS Tyrosine kinase catalytic domain signature 252 265 IPR001245 GO:0004672|GO:0006468
Mibi01g2608 455 PRINTS Tyrosine kinase catalytic domain signature 336 346 IPR001245 GO:0004672|GO:0006468
Mibi01g2608 455 PRINTS Tyrosine kinase catalytic domain signature 399 421 IPR001245 GO:0004672|GO:0006468
Mibi01g2608 455 ProSiteProfiles Protein kinase domain profile. 174 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2608 455 CDD STKc_MAP3K-like 181 428 - -
Mibi01g2608 455 FunFam Serine/threonine-protein kinase isoform 1 164 256 - -
Mibi01g2608 455 Gene3D Phosphorylase Kinase; domain 1 163 256 - -
Mibi01g2608 455 SUPERFAMILY Protein kinase-like (PK-like) 157 428 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2608 Mibi-ChrMibi01 44725405 44731951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2608 63 455 MAP Kinase Kinase Kinase AT2G24360 78.626 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi01g2608 PK_Tyr_Ser-Thr 2.5e-67 CL0016