Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2606 ATGGCACTTTGTGGTACAACTTATTATAATTCATGTTTTCCAGTGACCATAGTATTGATGCTTCTCTTCTTATATGGCGTTAATGTTCCTTCCTGCTTTGGTACTTCAGAACCAGAATTACTGCTCAAGTTCAAGAACTCGTTACAATATGAAAACGACACTGCGTTTTCCACTTGGAATACGTCTATCTCGCTGCCATGTTCTGGTAATAGTCCCAATTGGGTTGGGATTGTTTGTACGGAAGGCAAAATCTCGGGCTTGGTACTTGAGAGTATGGGACTGAAAGGTCTAATTGACATGGAGTCTCTTCAACAATTGCCTAATCTCAGAACATTAAGTTTCATCAACAATAATTTCCATATTACTTGGCCAGAACTGAACAAGCTAGCTCCTCTTAAGACCTTTTATCTTACTAATAATAAGTTTTACGGACAGATTCCTGCAAAGAGTTTTCAGAATATGAATTGGCTGAAGAAAGTTCATTTGGCGAATAATGAATTTTCGGGTGAAATTCCTTCTTCATTGGCCATGTTACCTAGGCTTGTGGAATTGAGATTAGAAGGCAATAAATTCAGTGGCAGAATTCCCAACTTTTTGCAGAAGAAATTGAAATCTTTCAGTGTAGCCAACAATCAATTGCATGGTAAAATACCTGCTAGCCTTGGTAAATTTTCCATCTCCTCCTTCTCCGGCAATGAAGGCTTATGTGGAACTCCATTGAGTGCATGTCATTCCTCCAGAAACCCCTCAATCATCACTATTGTGGTGGTTGCCATAGTGGTGGGCTTGGTGGTAATGATCATAGGATTACTAATCTTTCTTCTTCGTCGGAGAAAAAGATGGCGATCTGCAGGGTCGATGGAGGATCCACAATTGAACCAGAGAAAGACTACTCATTTCAAGGAAGTAGATGAAGGAAGTAATAACTCAAGAGCATCCGATGTTTCTAACCAGAGCAACAAAACATTTGAGAATATGAAGTTGTGCTTTGTGAGAGAAGACAAAGAGAGATTTGATTTACAGGACCTGCTAGGAGCCTCAGCTGAAATATTAGGCAGTGGCAACTTCACTTCTTCATACAAGGCTGCTTTGTTGAATGGGTCAATGATGGTGGTAAAGAGGTTTAGGCAAATGAACAATGTTGGGAAGAAAGAGTTTGAGGGACACATGAGGAGGTTAGGAAGATTGGATCACCCTTATCTGCTTCCTCTAGTGGCTTACTATTACAGAAAGGAGGAGAAATTGTTGATTACAGACTATGTTCAAAATGGTAGCCTGGAAGTTCGCCTTCATGGACCCCAAGATGCAGGCAAGGCAGCCCTTGATTGGCCAACACGATTGAAAATTGTTAAAGGAATCACAAAAGGTCTTGAATATCTCTACAATGAACTGCGAAGCCTAATTGCACCCCACGGACATCTTAAATCTTCAAATGTACTTCTTACTCAGTCTTATGAACCCCTTTTAACAGACTATGGCTTAATTCCAGTAATGAGCCAAGATCTTGCTAAGGACATTATGGTCATTTACAGGGCACCTGAGTATACACAAGAGGGTCAGATTACAAAGAAGACTGATTTATGGAGTCTTGGGGTACTAATTTTGGAGATAATGTGTGGGAGATTTGTAGGTAATGGAGGAGAGATGGAGTTGGTGAGTTGGGTGAAATGTGTGGAGCCAAAAGATTGGAGCAGTGAGGTTTTGGATAAAAAAATGAGCGGAACAAGGAACAATGAAGGTGAGATAGTGAAGCTTTTGAGGATTGCGTTGTATTGTTGTGAAGAAGATGTTAATAAGAGATTGGATTTGCAAGAAGTGGTTGAGAAAATTCATGAAGTGAAGGAGAGGGATCAGGAAGATGATTTTTATTCTTCAAGCTGA 1881 0.4019 MALCGTTYYNSCFPVTIVLMLLFLYGVNVPSCFGTSEPELLLKFKNSLQYENDTAFSTWNTSISLPCSGNSPNWVGIVCTEGKISGLVLESMGLKGLIDMESLQQLPNLRTLSFINNNFHITWPELNKLAPLKTFYLTNNKFYGQIPAKSFQNMNWLKKVHLANNEFSGEIPSSLAMLPRLVELRLEGNKFSGRIPNFLQKKLKSFSVANNQLHGKIPASLGKFSISSFSGNEGLCGTPLSACHSSRNPSIITIVVVAIVVGLVVMIIGLLIFLLRRRKRWRSAGSMEDPQLNQRKTTHFKEVDEGSNNSRASDVSNQSNKTFENMKLCFVREDKERFDLQDLLGASAEILGSGNFTSSYKAALLNGSMMVVKRFRQMNNVGKKEFEGHMRRLGRLDHPYLLPLVAYYYRKEEKLLITDYVQNGSLEVRLHGPQDAGKAALDWPTRLKIVKGITKGLEYLYNELRSLIAPHGHLKSSNVLLTQSYEPLLTDYGLIPVMSQDLAKDIMVIYRAPEYTQEGQITKKTDLWSLGVLILEIMCGRFVGNGGEMELVSWVKCVEPKDWSSEVLDKKMSGTRNNEGEIVKLLRIALYCCEEDVNKRLDLQEVVEKIHEVKERDQEDDFYSSS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2606 626 Gene3D Phosphorylase Kinase; domain 1 309 420 - -
Mibi01g2606 626 MobiDBLite consensus disorder prediction 294 308 - -
Mibi01g2606 626 FunFam pollen receptor-like kinase 1 314 420 - -
Mibi01g2606 626 Gene3D Ribonuclease Inhibitor 152 239 IPR032675 -
Mibi01g2606 626 MobiDBLite consensus disorder prediction 285 317 - -
Mibi01g2606 626 Gene3D Ribonuclease Inhibitor 36 151 IPR032675 -
Mibi01g2606 626 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Mibi01g2606 626 SUPERFAMILY Protein kinase-like (PK-like) 349 611 IPR011009 -
Mibi01g2606 626 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Mibi01g2606 626 ProSiteProfiles Protein kinase domain profile. 345 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2606 626 SUPERFAMILY L domain-like 36 240 - -
Mibi01g2606 626 Gene3D Transferase(Phosphotransferase) domain 1 421 625 - -
Mibi01g2606 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 618 - -
Mibi01g2606 626 Pfam Protein kinase domain 349 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2606 Mibi-ChrMibi01 44684625 44688835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2606 7 625 Receptor kinase-like Gene Family AT5G35390 49.074 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi01g2606 Pkinase 1e-27 CL0016