Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2605 ATGGGTATTTGCTTCAGCATTGACTCTGATACAAAGGCCCCAGGATATGAATCTGTCACACAGACAGCTAAGCAAGATAGAAGTAGAAGCTACAGTTCATCATCTCCTATGAATATCAAAGATCTCCGGCAAAGTCCTGGCTCTAGGAATGTTGATATATTTTCCTATGATGAGCTGAGGTTGGCCACCAAGCACTTTCGACCAGACTTAATTCTGGGAGAGGGCGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTAAGGCCAGGTTACAAGACCACACAGGTTGCTATTAAGGAGCTAAATCGAGAAGGAATTCAGGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGCCAGTTCAGTCACTCAAATCTTGTAAAGCTTATCGGATATTGTTGTGAGGATGAACATCGGTTACTAGTCTATGAATACATGGCGAGTGGGAGCTTGGAAAAACACCTTTTCCGCAGACTGGGCTCATTGCTTACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAGAGGCCCATAATTTATCGTGACTTCAAGACATCAAATATTTTGCTTGATGCGGATTTCAATGCAAAGCTTTCAGATTTTGGTCTTGCAAAGGATGGACCTATAGGAGACCAAACACATGTTTCAACACGTGTGATGGGCACATATGGATATGCTGCGCCTGAGTATGTGATGACTGGGCATTTAACAGCTAGAAGTGATGTGTATGGTTTTGGGGTAGTGCTACTTGAGTTGCTTATTGGAAGGAGAGCATTGGACAAGAGCAGGCCAAGCAGACAACATAACTTGGTTGAGTGGGCACGTCCACTGTTGAATCATAATAAGAAACTCCTTAAAATCTTAGACCCTAGAATGGATGGACAATATTCTGCTAAAACTGCAATAAAGGTGGCCCAACTGGCAAACCAATGTCTTAGCCAAAACCCAAAAGGAAGGCCTCTTATGAGTCAGATTGTTGAACTTCTTGAAAAATTTCAGTCAAAGGAGGGGAATGAAGAAGAGCAAATGCTTCGAATTGGCAGCAGTAGTATAACTCTTTATGAGGTTCCAAATGACTCTAGAGAAACTTGA 1134 0.4206 MGICFSIDSDTKAPGYESVTQTAKQDRSRSYSSSSPMNIKDLRQSPGSRNVDIFSYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKTTQVAIKELNREGIQGDREWLAEVNYLGQFSHSNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRLGSLLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPIGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSRQHNLVEWARPLLNHNKKLLKILDPRMDGQYSAKTAIKVAQLANQCLSQNPKGRPLMSQIVELLEKFQSKEGNEEEQMLRIGSSSITLYEVPNDSRET 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2605 377 Gene3D Phosphorylase Kinase; domain 1 40 148 - -
Mibi01g2605 377 PANTHER OS01G0588500 PROTEIN-RELATED 33 347 - -
Mibi01g2605 377 FunFam Serine/threonine-protein kinase BIK1 33 148 - -
Mibi01g2605 377 MobiDBLite consensus disorder prediction 14 44 - -
Mibi01g2605 377 SUPERFAMILY Protein kinase-like (PK-like) 45 344 IPR011009 -
Mibi01g2605 377 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Mibi01g2605 377 FunFam Probable serine/threonine-protein kinase PBL8 149 362 - -
Mibi01g2605 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mibi01g2605 377 Gene3D Transferase(Phosphotransferase) domain 1 149 366 - -
Mibi01g2605 377 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
Mibi01g2605 377 CDD STKc_IRAK 72 346 - -
Mibi01g2605 377 ProSiteProfiles Protein kinase domain profile. 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2605 Mibi-ChrMibi01 44631644 44639894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2605 54 343 Glycoside Hydrolase AT3G07070 51.195 9.52e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi01g2605 PK_Tyr_Ser-Thr 6e-47 CL0016