Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2597 ATGGAAAACTTTGCATCCAGCTTCATGAGTCAACAACATGGCCCCATCAATGGTAATCTTTTCTTTCATAATACCACCAATCAAACTTTCTTCTCAGGATCTCTTCCTCATTACCATACCCCATCATGTAACACAGTGGGTACAAAATCACCAAAGTCATCAAATTTGAGCAACAGGAAGCCATCTATAAACATCACAATCCCTCCCATGGGCATAAGGATGACCCCATCATCAACATCATCATCATCATTGGATTTCACAGAGAACAAGCACTACAGAGGGGTTCGAAGGCGGCCATGGGGGAAATTTGCGGCGGAGATTCGTGACCCCAATCGAAAGGGATCAAGGGTTTGGCTTGGAACCTTTGATACAGCCATGGAAGCAGCAAAAGCATATGATAGAGCTGCTTTTAAGATGAGAGGAAGCAAAGCTATACTGAATTTCCCTCTTGAGATTGGGGCAAGTTCTGAGGAAACATCTAAGTCAACAGTGGAAAAACTGGTTGGTGAGAAAAGGGGAAGAGAGAAAGAAGAGGAAAGGAATGAAGAATCAAAGAAGATGAAGAAAGAGGATGAGGAAGAAAAGGAAGATGCAGTTTCATGTTCATCACCCACAAGTGGGATTGTTTCTTCTTCTTCTTCTTTAACGGTTGGGCCGTTAACGCCGTCATGTTGGAAGGGGTTTTGGGATCCTGAGGTTGACAATGACAACACTATTTTCAGTGTTCCTCCGTTATCGCCGTTATCTCCTCCAATGATGGTTGTGAGGTAG 771 0.4358 MENFASSFMSQQHGPINGNLFFHNTTNQTFFSGSLPHYHTPSCNTVGTKSPKSSNLSNRKPSINITIPPMGIRMTPSSTSSSSLDFTENKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAMEAAKAYDRAAFKMRGSKAILNFPLEIGASSEETSKSTVEKLVGEKRGREKEEERNEESKKMKKEDEEEKEDAVSCSSPTSGIVSSSSSLTVGPLTPSCWKGFWDPEVDNDNTIFSVPPLSPLSPPMMVVR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2597 256 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Mibi01g2597 256 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Mibi01g2597 256 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Mibi01g2597 256 CDD AP2 90 149 IPR001471 GO:0003700|GO:0006355
Mibi01g2597 256 MobiDBLite consensus disorder prediction 71 86 - -
Mibi01g2597 256 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Mibi01g2597 256 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Mibi01g2597 256 MobiDBLite consensus disorder prediction 45 86 - -
Mibi01g2597 256 MobiDBLite consensus disorder prediction 45 64 - -
Mibi01g2597 256 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Mibi01g2597 256 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Mibi01g2597 256 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Mibi01g2597 256 MobiDBLite consensus disorder prediction 156 217 - -
Mibi01g2597 256 MobiDBLite consensus disorder prediction 163 199 - -
Mibi01g2597 256 MobiDBLite consensus disorder prediction 200 217 - -
Mibi01g2597 256 Coils Coil 173 196 - -
Mibi01g2597 256 PANTHER DNA-BINDING DOMAIN 62 195 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2597 Mibi-ChrMibi01 44413291 44414061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2597 53 247 AP2-EREBP Transcription Factor Family AT5G51190 47.716 8.92e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g2597 AP2 8.7e-16 CL0081