Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2585 ATGGCGGTAAATGAAGATACAGAACGAGAATATGTACCTCATAAAGAGAAGCAATCTTCAGAGGAAGACAAGAGGAAGAAGAAAATTGTACCTGGGAGTTTGATGAAAGCTCTAATGAGGCCTGGAGCGGGTGACTTGACGCCTTCAGAGGGTGATCAGATCATATATCATTGTACAATTCGAACTTTAGATGGAGTCATTGTGCAATCTACAAGATCAGAGCTTGGAGGGAGTGGCATCCCGACAAGACATGTATTGGGCAAGAGCAAGATTCTATTGGGTTTGTTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTAGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGCGAGGAAGATTGCCCTATTTCTGCTCCTGATGGGTTTCCAAGAGAAGATGAACTTCATTTTGAAATTGAGCTGATAGATTTTTTCAAAGCCAAGGTTGTTACTGATGACTTGGGAGTTATAAAAAAGGTGATATGTGAAGGGCAGGGTTGGGAATCTCCACGAGAACCTTATGAAGTGAAAGCTTGGATATCAGCAAAGACAGTTGCGGGGAAGGTGATTGTGTCCCACACAGAAGGAGAACCTTATTTTTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGAACAATGACGCGGGAAGAGAAGGCTGTAATATTCGTTCATCGTCAGTATCTAACTCAGTCTCCCCTGATCCCATTGAATGAAGATTACGAAGAAGTCCAGTTTGAAGTGGAGCTTGTCCACTTTATTCAAGTTAGAGATATGCTTGGGGATGGGCGCCTAATAAAACGTCGGATTCGTGATGGGAAAGGGGATTTTCCAATGGATTGCCCTCTCCAGGATAGTCTACTTCGTGTTCATTACAAGGGTATGGTTCTTGATGAAGAAAAAAGGGTATTCTATGACACAAAAGTTGATAATGACGGTCAACCACTGGAGTTCTGTTCTGGAGAAGGGCTTGTGCCAGAGGGGTTTGAAATGTGTGTACGTCTAATGCTGCCTGGAGAGGTGGCCCTCGTCACTTGTCCCCCAGACTATGCTTATGATAAGTTTCCTAGGCCTGCAAATGTTCCTGAGGGTGCTAATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAACGCCAAAGGACTGGACTGGATTTGACTTCAAAAGTATAATGGATGACGCTGAGAAAATCAGAAATACGGGTAACAGACTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTACTTCGAGAATTTCATCATGTCAATCCACAAGATGATGAGGAAGGAAAAGTATTTTCAGATACACGTAATTTGTTACATCTGAATGTGGCTGCATGCTATCTGAAATTGGGAGAATTTAGAAAGTCCATTGAGTTTTGCAATAAGGTTTTGGATGCAAACCCTGCACATATCAAGGGTCTTTACCGTCGTGGAATGGCATACATGGCAGCTGGAGATTTTGAAGAAGCAAAGATTGATTTCAATATGATGATGAAAGTTGACAAATCAGCTGAACCTGATGCAACTGCAGCTCTCCATAAACTGAAACAGAAGGAGCAGGAAGCTGAGAAGAAAGCTCGAAAGCAATTTAAAGGCCTTTTCGACAAGAAACCTGGAGAAATTGCAGAAGTTGCGGCAGAAGAGGATGAAGATCAGAAGACAAGTGAAAGCAAGGAGGAGGATGAAGGACATGGACGTTCTGATGGGAGCTCATCAGAGGAGGATTCACATGAAGTTGCACCTGATGCCCCTCCAATGGGGTTGTTTTCTCGCCTTTGGCCAAGCAGATTATTATCATCCTTTTGGCTTCGAAGATGTACAATCCTGTGA 1869 0.4248 MAVNEDTEREYVPHKEKQSSEEDKRKKKIVPGSLMKALMRPGAGDLTPSEGDQIIYHCTIRTLDGVIVQSTRSELGGSGIPTRHVLGKSKILLGLLEGIPTMLKGEVAMFKMKPQLHYGEEDCPISAPDGFPREDELHFEIELIDFFKAKVVTDDLGVIKKVICEGQGWESPREPYEVKAWISAKTVAGKVIVSHTEGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIFVHRQYLTQSPLIPLNEDYEEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLQDSLLRVHYKGMVLDEEKRVFYDTKVDNDGQPLEFCSGEGLVPEGFEMCVRLMLPGEVALVTCPPDYAYDKFPRPANVPEGANIQWEIELLGFETPKDWTGFDFKSIMDDAEKIRNTGNRLFKEGKYELAKAKYEKLLREFHHVNPQDDEEGKVFSDTRNLLHLNVAACYLKLGEFRKSIEFCNKVLDANPAHIKGLYRRGMAYMAAGDFEEAKIDFNMMMKVDKSAEPDATAALHKLKQKEQEAEKKARKQFKGLFDKKPGEIAEVAAEEDEDQKTSESKEEDEGHGRSDGSSSEEDSHEVAPDAPPMGLFSRLWPSRLLSSFWLRRCTIL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2585 622 MobiDBLite consensus disorder prediction 570 593 - -
Mibi01g2585 622 FunFam Peptidylprolyl isomerase 389 545 - -
Mibi01g2585 622 Coils Coil 521 541 - -
Mibi01g2585 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 381 IPR001179 GO:0003755
Mibi01g2585 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 144 IPR001179 GO:0003755
Mibi01g2585 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 257 IPR001179 GO:0003755
Mibi01g2585 622 SUPERFAMILY FKBP-like 253 383 - -
Mibi01g2585 622 FunFam Peptidylprolyl isomerase 151 261 - -
Mibi01g2585 622 FunFam Peptidylprolyl isomerase 8 150 - -
Mibi01g2585 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Mibi01g2585 622 SUPERFAMILY TPR-like 398 538 IPR011990 GO:0005515
Mibi01g2585 622 Pfam Tetratricopeptide repeat 454 483 IPR019734 GO:0005515
Mibi01g2585 622 Pfam Tetratricopeptide repeat 485 507 IPR019734 GO:0005515
Mibi01g2585 622 MobiDBLite consensus disorder prediction 1 27 - -
Mibi01g2585 622 FunFam Peptidylprolyl isomerase 262 386 - -
Mibi01g2585 622 MobiDBLite consensus disorder prediction 554 600 - -
Mibi01g2585 622 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Mibi01g2585 622 SMART tpr_5 450 483 IPR019734 GO:0005515
Mibi01g2585 622 SMART tpr_5 401 434 IPR019734 GO:0005515
Mibi01g2585 622 SMART tpr_5 484 517 IPR019734 GO:0005515
Mibi01g2585 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Mibi01g2585 622 ProSiteProfiles TPR repeat profile. 450 483 IPR019734 GO:0005515
Mibi01g2585 622 SUPERFAMILY FKBP-like 150 260 - -
Mibi01g2585 622 Gene3D - 150 261 IPR046357 GO:0003755
Mibi01g2585 622 Gene3D - 262 387 IPR046357 GO:0003755
Mibi01g2585 622 Gene3D - 2 149 IPR046357 GO:0003755
Mibi01g2585 622 Gene3D Tetratricopeptide repeat domain 395 549 IPR011990 GO:0005515
Mibi01g2585 622 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 150 262 - -
Mibi01g2585 622 SUPERFAMILY FKBP-like 23 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2585 Mibi-ChrMibi01 44092374 44108051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2585 47 549 Calmodulin-binding Proteins AT5G48570 31.008 5.20e-64 219