Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2579 ATGCTGGCAATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCAGATTGATTCGTCTAGTGATGGGAGAGTTCAGAGATCTCAGAACATTACTTTCCGAGCTCCTCAGGAGAAATGCACCATCCAGGACTTCGAATTGGGAAAGATCTACGGCATTGGTTCTTACTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGATCTGTATATGCATTGAAGATCATGGATAAAAAATTTATCGCCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGCTAGTGCTTGATAAATTGGATCATCCTGGCATTGTGAGGCTGTTTTTCACATTTCAAGACACTTTTTCTCTCTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTTTGTCTGAGGCTGAAGCACGATTCTATGCAGCTGAACTTGTGGATGCTCTTGATTACATACATAATTTGGGCTTGATACATCGTGATATCAAGCCAGAGAACTTGCTGCTTACAGCTGAAGGACATATTAAATTAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGGTAGCCAAATCATGGACTTCCTTCCAAATGCAGCATCAGATGATAGAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACACTTGGAAATGACCTCTGGGCCCTTGGTTGCACAATATACCAAATGCTCTCGGGAACATCTCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATAATAGCTAGAGATATCCAATTTCCAGACTATTTTTCGGATGAGGCAAGGGACCTTATTAACCGGTTACTGGATTTGGATCCCAGCAGGAGACTAGGTGCCGGATGTGCTGGTTATACCGACTTGAAAATGCATCCATTTTTCAAGGGAATAGACTGGAGTAATATTCGGGATCAACTGCCCCCCAAACTTGCTATGGAACCAGGGTCACCTGTAGGTGATGATGCTTATGATTCGTCATGGAACCTTTTTCACGTTGGTGATAGTTCTTCTAGGCAACCTGATGGAAATAATGGTGCTTCATCATCTTCTGAGGGGTTTGGTCACATGACAAAGCTCGCCTCAATAGATTCTTTCGATTCAAAATGGCAAAAATTTTTGGATCCTAGCGAATCTGTTGTTATGATCTCAATGGTAAAAAAGATGCAGAAACTAACAAGCAAGAAGGTGCAGCTTATCCTTACTAACAAACCAAAGCTGATCTATGTGGATCCATCAAAGCTTATTGTGAAGGGAAATATAATATGGTCTAATAATCCAAATGAATTAAGCATTCAAGTGACAAGTCCATCTTGTTTCAAAATTTGCACGCAAAAGAAGATATTTTCATTTGAGGATGCCAAGCAAAGAGCTTATCAGTGGAAGAAAGCAATTGAAGGGCTACAAAACCGGTGA 1467 0.4138 MLAMEKDFDSKLRIQIDSSSDGRVQRSQNITFRAPQEKCTIQDFELGKIYGIGSYSKVVRAKKKDTGSVYALKIMDKKFIAKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEAEARFYAAELVDALDYIHNLGLIHRDIKPENLLLTAEGHIKLADFGSVKPMQGSQIMDFLPNAASDDRACTFVGTAAYVPPEVLNSSPATLGNDLWALGCTIYQMLSGTSPFKDASEWLIFQRIIARDIQFPDYFSDEARDLINRLLDLDPSRRLGAGCAGYTDLKMHPFFKGIDWSNIRDQLPPKLAMEPGSPVGDDAYDSSWNLFHVGDSSSRQPDGNNGASSSSEGFGHMTKLASIDSFDSKWQKFLDPSESVVMISMVKKMQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSNNPNELSIQVTSPSCFKICTQKKIFSFEDAKQRAYQWKKAIEGLQNR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2579 488 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2579 488 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2579 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mibi01g2579 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 328 - -
Mibi01g2579 488 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Mibi01g2579 488 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
Mibi01g2579 488 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Mibi01g2579 488 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2579 488 FunFam 3-phosphoinositide-dependent protein kinase 1 358 488 - -
Mibi01g2579 488 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Mibi01g2579 488 Pfam PH domain 385 487 IPR033931 -
Mibi01g2579 488 Coils Coil 468 488 - -
Mibi01g2579 488 Gene3D - 364 488 IPR011993 -
Mibi01g2579 488 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Mibi01g2579 488 SUPERFAMILY PH domain-like 306 487 - -
Mibi01g2579 488 SUPERFAMILY Protein kinase-like (PK-like) 26 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2579 Mibi-ChrMibi01 43884065 43894094 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2579 1 488 AGC Kinase Gene Family AT3G10540 77.143 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Mibi01g2579 Pkinase 1.8e-64 CL0016