Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2573 ATGGGGAATAATTGTGTTGGTCCGAGCATTTCAAAAAATGGTATTCTCCAATCAGTTTCTGCGGTAATATGGAAATCTCGCACACTCGATGATGAATCAGTTTCCAATAAAGGAACTGTAGATGGGGAAACAGCAAGAGAACCGGAATCATCATCGTCCATGCCTGTCCAATGCAAACCCCCTGTTCAAATAACTATTCCGAAACCGGAAGTGAAACCAGAAGAGATGTCAGAACCCAAACCAGATGATAAATCGGATCAAGACCAGAAATCTAAACACAAGAAACCTGCTTCATTTAAAAGGGTATCTAGTGCAGGGCTCCGTGTTAATTCTGTATTACAAACAAACACTGGTAATTTCAAGGAGTTTTATATACTGGGGAGAAAATTGGGACAGGGTCAGTTTGGGACAACATTTTTATGTGTGGAGAAGGAAACGGGTAGAGAGTATGCCTGTAAATCTATGGCAAAAAGGAAGATGGTGAGTGATGAGGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCATCACTTGGCTGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAAGATGCATTAGCTGTTCATGTTGTGATGGAGTTATGTGCAGGTGGTGAGCTTTTTGACAGGATTATTCAGCGTGGACATTATACAGAGAGAAAGGCAGCCAACCTAATTAGGACTATAGTTGGGGTTGTGGAAGCTTGTCATTCTCTTGGTGTGATGCACAGGGATCTTAAACCTGAAAACTTTCTCTTTGTCAACCAGCAGGAGGACTCTCCTCTCAAAACCATAGACTTCGGATTATCTGTATTTTTTAAACCAGGTGATGTATTCACAGACGTGGTTGGCAGCCCTTATTATGTTGCCCCTGAGGTTTTAAGAAAGTGTTATGGCCCAGAAGCAGATGTTTGGAGTGCTGGGGTAATCCTTTACATACTTTTGAGTGGAGTTCCCCCATTTTGGGCAGAAAATGAGGATGGAATATTTAAAGAAGTTTTGCATGGTGATCTTGACTTTTCATCTGATCCCTGGCCTAGCATTTCTGAAAGTGCCAAAGATTTAGTAAGGAAAATGCTTGTTCGTGATCCTAGAAGGCGGCTGACTGCACATCAAGTTTTATGTCATCCTTGGATTCAAGTTGATGGTGTAGCTCCTGACAAACCACTTGATTCTGCTGTATTAACTCGTTTGAAGCAATTCTCTGCTATGAATAAGTTCAAGAAAATGGCTCTTATAGTTATTGCAGAGAACTTATCTGAAGAAGAAATAGCTGGCTTGAAAGAAATGTTCAAGATGATAGATACTGACAATAGTGGTCAGATTACATTTGATGAGCTTAAGGCTGGTTTGAAAAGAGTGGGTGCTAATCTGAAAGAGTCTGAAATTTATGATTTGATGCAAGCAGCTGATGTTGACAATAGTGGAACGATCGATTATGGGGAGTTTATAGCTGCAACTTTGAATCGAAACAAGATTGAAAGAGAAGATCACCTTGTTGCGGCCTTTTCTTACTTCGATAAGGATGGAAGTGGCTATATTACTCTTGATGAACTTCAACAAGCTTGTGAGGAATTTGGTATGGAAGATGTCCGCTTGGAAGAGACAATCAAGGAAATCGATCAAAATAATGACGGGAGGATAGATTATAATGAGTTTGTAGCCATGATGCAGAAAGGAAATGTTCCTGTAATTGGTAGGAAGGGATTAGAAAATAGCTTCAGCATCGGTTTTAGGGGAAGGCATTGA 1758 0.4039 MGNNCVGPSISKNGILQSVSAVIWKSRTLDDESVSNKGTVDGETAREPESSSSMPVQCKPPVQITIPKPEVKPEEMSEPKPDDKSDQDQKSKHKKPASFKRVSSAGLRVNSVLQTNTGNFKEFYILGRKLGQGQFGTTFLCVEKETGREYACKSMAKRKMVSDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDALAVHVVMELCAGGELFDRIIQRGHYTERKAANLIRTIVGVVEACHSLGVMHRDLKPENFLFVNQQEDSPLKTIDFGLSVFFKPGDVFTDVVGSPYYVAPEVLRKCYGPEADVWSAGVILYILLSGVPPFWAENEDGIFKEVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPRRRLTAHQVLCHPWIQVDGVAPDKPLDSAVLTRLKQFSAMNKFKKMALIVIAENLSEEEIAGLKEMFKMIDTDNSGQITFDELKAGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLNRNKIEREDHLVAAFSYFDKDGSGYITLDELQQACEEFGMEDVRLEETIKEIDQNNDGRIDYNEFVAMMQKGNVPVIGRKGLENSFSIGFRGRH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2573 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 114 556 - -
Mibi01g2573 585 Gene3D Transferase(Phosphotransferase) domain 1 210 406 - -
Mibi01g2573 585 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Mibi01g2573 585 MobiDBLite consensus disorder prediction 28 101 - -
Mibi01g2573 585 FunFam Calcium-dependent protein kinase SK5 292 387 - -
Mibi01g2573 585 MobiDBLite consensus disorder prediction 71 93 - -
Mibi01g2573 585 SUPERFAMILY EF-hand 421 562 IPR011992 -
Mibi01g2573 585 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Mibi01g2573 585 Pfam Protein kinase domain 126 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2573 585 Gene3D Phosphorylase Kinase; domain 1 125 209 - -
Mibi01g2573 585 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Mibi01g2573 585 SMART efh_1 429 457 IPR002048 GO:0005509
Mibi01g2573 585 SMART efh_1 465 493 IPR002048 GO:0005509
Mibi01g2573 585 SMART efh_1 535 563 IPR002048 GO:0005509
Mibi01g2573 585 SMART efh_1 501 529 IPR002048 GO:0005509
Mibi01g2573 585 Gene3D - 407 566 - -
Mibi01g2573 585 MobiDBLite consensus disorder prediction 38 59 - -
Mibi01g2573 585 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Mibi01g2573 585 ProSiteProfiles EF-hand calcium-binding domain profile. 535 566 IPR002048 GO:0005509
Mibi01g2573 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mibi01g2573 585 Pfam EF-hand domain pair 501 561 IPR002048 GO:0005509
Mibi01g2573 585 Pfam EF-hand domain pair 430 490 IPR002048 GO:0005509
Mibi01g2573 585 SMART serkin_6 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2573 585 SUPERFAMILY Protein kinase-like (PK-like) 123 383 IPR011009 -
Mibi01g2573 585 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Mibi01g2573 585 ProSiteProfiles Protein kinase domain profile. 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2573 585 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Mibi01g2573 585 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Mibi01g2573 585 CDD EFh 430 489 IPR002048 GO:0005509
Mibi01g2573 585 CDD STKc_CAMK 123 381 - -
Mibi01g2573 585 CDD EFh 501 561 IPR002048 GO:0005509
Mibi01g2573 585 FunFam CDPK-related kinase 3 116 284 - -
Mibi01g2573 585 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Mibi01g2573 585 FunFam Calcium-dependent protein kinase 1 390 564 - -
Mibi01g2573 585 FunFam Calcium-dependent protein kinase 1 126 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2573 Mibi-ChrMibi01 43623038 43635634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2573 1 582 EF-hand Containing Proteins AT5G04870 75.367 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi01g2573 Pkinase 2e-74 CL0016