Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2545 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACCGAGGATGAAATCCTCAAAGCGGCTGTCATGAAATATGGTAAAAACCAATGGGCTCGAATATCTTCGCTTCTGGTTCGCAAATCCGCCAAGCAATGTAAAGCTCGATGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAATGGACAAGAGAAGAGGATGAAAAGCTTCTCCATCTTGCTAAGCTTATGCCCACACAATGGAGAACAATTGCTCCTATTGTAGGGCGTACCCCTTCCCAGTGCCTTGAACGGTATGAGAAACTCCTTGATGCAGCCTGTGTCAAGGATGAGAACTATGAACCTGGTGATGACCCTCGGAAGTTGCGACCTGGTGAGATTGACCCAAACCCTGAGTCAAAGCCTGCGCGACCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCTGAAGCACGAGCTAGGTTAGCCAACACCAAGGGTAAAAAGGCAAAACGGAAAGCTAGGGAGAAACAACTTGAAGAAGCAAGGAGGCTTGCCTCTTTACAGAAAAAGAGAGAATTGAAGGCTGCTGGAATTGATGTCAGGCATCGGAGGAGGAAAAGGAAAGGAATAGATTATAATGCAGAAATCCCATTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACCGGTGGAACAGCCCAAGTTCCCTACCACAATTGAAGAACTTGAGGGGAAAAGAAGGATTGATGTGGAAGCGCAGTTAAGAAAGCAAGACGCTGCAAAGAATAAGATTGCACAAAGGCAAGATGCCCCCACTGCTATACTGCATGCCAACAAGCTCAATGACCCTGAAACAGTTAGAAAAAGGTCAAAATTGATGCTTCCACCTCCCCAAATTTCTGATCATGAATTAGAAGAAATTGCAAAGATGGGTTATGCTAGTGACCTTGCGGGGAGTGAGGAAATTGCTGAAGGTGGTGGTGCAACACATGCTCTCCTGGCGAATTATGCGCAGACCCCTGGCCAGGGAATGACTCCTTTACGAACTCCTCAGAGAACACCAGCTGGTAAAGGGGATGCTATCATGATGGAAGCTGAAAATCTGGCAAGGTTGAGGGAGTCTCAGACACCATTGTTTGGAGGAGATAACCCTGAGTTGCACCCTTCAGACTTTTCTGGGGTCACTCCTAAGAAAAAAGAAATTCAGACTCCAAATCCGATGATGACTCCCTCTGCAACGCCCGGAGGTGCAGGCCTCACTCCTAGAAGTGGTATGACACCATCAAGAGATGGCTTTTCTTTTGGCATGACTCCTAAGGGAACTCCTCTGAGGGATGAGCTTCGTATCAATGAAGACATGGATATGCATGAGAGCACAAAACTTGAGCTACGTAGACAAGCTGATCTCAAAAGAAGCTTGCGCTCTGGTTTAAGCGGTCTTCCACAGCCAAAAAATGAATACCAGATAGTTATGCAACCAGCTCCAGAAGATGTTGAAGAACCCGAGGAAAAGATTGAAGAGGATATGTCCGACAGAATGGCTCGAGAAAAAGCTGAAGAAGAAGCTCGGCAACAAGCATTACTTAGAAAACGATCAAAGGTTCTTCAAAGGGAGCTTCCTAGGCCTCCTGCTGCATCACTGGAACTGATAAAAAATTCGTTGATTGTTGCTGATGGGGATAAGAGTTCCTTTGTTCCTCCTACTTCTATCGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTGAGCTTACTGGAACATGACAATGCCAAGTACCCACTTGATGAGAAAGTTAATAAGGAGAGGAAAAAAGGGGTTAAGCGTGCTGCAACCGGGTCTGCTGGTGTCCCTGTGATTGAAGATTTTGAGGAAGATGAAATGAAAGATGCTGATCAGTTGATAAAAGAGGAGGCTCAGTATCTACGTGTAGCAATGGGACATGAAAGTGAACCCCTTGATGAATTCGTTGAAGCACATAGAACTTGCCTGAATGATCTTATGTATTTCCCTACCCGTAATGCTTATGGGTTGTCAAGTGTTGCTGGAAACATGGAGAAGCTTGCAGCTTTGCAGAATGAATTGGAGAATGTGAGGAAAAAGTTGGATGATGGCAAGGAGAAGGTTGTACGTCTTGAGAAGAAGGTGATGGTTATTACACAAGGCTATGAGATGAGGGCAAAGAAAAGTCTCTGGCCACAAATTGAAGCCACATTCAAGCAGATGGACACTGCTGCAACAGAACTGGAGTGCTTCCGAGTTTTGCAAAAGCAGGAGCAGCTAGCTGCTTCGCATCGGATAAATAATATATGGTCTGAAGTAGAGAAGCAGAAGGAACTTGAGAAAATCTTACAAAAGAAATATGGGGATCTTCTGGCAGAAATGGAAGGGATTCAAAGCATTATGAACCAGTACAGGGCGCATTCCAACCAGCAAGAAGTTGCTGCTAAGGAGCATTCTCTTGAGTCAGTTGAAATTGCATCTGATGAGCCGAGCATACCGGGTACAGAGAATCACGAAAGTATATTACACTCAGATGAGGATGGAAGTGCTATGTTAGTGAATTCAACACATGAAGAAACTTCGGGACAGCAAGTAGAAATGATACAAGGAGAGGCCATGTCAGGCCCCCAAAATGATTCTGATGTGGATGCTAATAAAGAGCAAATGTCACACGACGTTGATGTCAAACTCCAAGATGGGACAACGACACCTGTTGAAGAGGAAGGGGTCCGTGCTCCCGAAGATACAGAAGTATAG 2766 0.4497 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRHRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDAAKNKIAQRQDAPTAILHANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGYASDLAGSEEIAEGGGATHALLANYAQTPGQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLFGGDNPELHPSDFSGVTPKKKEIQTPNPMMTPSATPGGAGLTPRSGMTPSRDGFSFGMTPKGTPLRDELRINEDMDMHESTKLELRRQADLKRSLRSGLSGLPQPKNEYQIVMQPAPEDVEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIKNSLIVADGDKSSFVPPTSIEQADEMIRKELLSLLEHDNAKYPLDEKVNKERKKGVKRAATGSAGVPVIEDFEEDEMKDADQLIKEEAQYLRVAMGHESEPLDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNELENVRKKLDDGKEKVVRLEKKVMVITQGYEMRAKKSLWPQIEATFKQMDTAATELECFRVLQKQEQLAASHRINNIWSEVEKQKELEKILQKKYGDLLAEMEGIQSIMNQYRAHSNQQEVAAKEHSLESVEIASDEPSIPGTENHESILHSDEDGSAMLVNSTHEETSGQQVEMIQGEAMSGPQNDSDVDANKEQMSHDVDVKLQDGTTTPVEEEGVRAPEDTEV 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2545 921 Coils Coil 167 187 - -
Mibi01g2545 921 MobiDBLite consensus disorder prediction 213 234 - -
Mibi01g2545 921 CDD SANT_CDC5_II 55 106 - -
Mibi01g2545 921 SMART sant 58 105 IPR001005 -
Mibi01g2545 921 SMART sant 6 55 IPR001005 -
Mibi01g2545 921 MobiDBLite consensus disorder prediction 113 149 - -
Mibi01g2545 921 FunFam CDC5 cell division cycle 5-like 60 120 - -
Mibi01g2545 921 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Mibi01g2545 921 MobiDBLite consensus disorder prediction 381 446 - -
Mibi01g2545 921 Gene3D - 5 59 - -
Mibi01g2545 921 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Mibi01g2545 921 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Mibi01g2545 921 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Mibi01g2545 921 MobiDBLite consensus disorder prediction 399 413 - -
Mibi01g2545 921 CDD SANT 10 53 IPR001005 -
Mibi01g2545 921 Coils Coil 683 717 - -
Mibi01g2545 921 MobiDBLite consensus disorder prediction 858 886 - -
Mibi01g2545 921 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Mibi01g2545 921 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Mibi01g2545 921 Gene3D - 60 114 - -
Mibi01g2545 921 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 804 - -
Mibi01g2545 921 FunFam CDC5 cell division cycle 5-like 5 59 - -
Mibi01g2545 921 MobiDBLite consensus disorder prediction 858 921 - -
Mibi01g2545 921 Pfam Myb-like DNA-binding domain 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2545 Mibi-ChrMibi01 42964723 42969525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2545 1 832 MYB-Related Transcription Factor Family AT1G09770 76.407 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g2545 Myb_Cef 2.6e-60 No_clan