Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2536 ATGTCTCTCAGAAAATCTCCACTTCCACGTCTCCTCCTCAATGATGTTTCCTGCATGAGAAATGCCCAACAAATTCTTCATCATGTGAATGTATCACTTCATGATGGTAGTGCACTCGTGCTGACCGGTGCAAATGGCTCTGGTAAGACAACTTTCTTACGCATGTTAGCAGGATTTTCTCGTCCTTCGGCTGGTGAAATCCTTTGGAATGGCCATGACATTACACAATCTGGAATATTTCATCAGTATAAGCTTCAGCTCAACTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAGTTTACAGTTCTTGATAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGTAGGTCCTTGCCTGCACTCGAGTTGATGGGTCTCGGAAGATTGGCTAATGAGAGGCCGAGTAGATTGTCGATGGGCCAGCGTAAAAGATTGCAACTTGCCAGATTGTTGGCAATCGACCGTCCGATTTGGTTGCTTGATGAGCCTTCAGTTGCATTAGATGATGAAGGGGTGAAGTTACTTGAGTACATAATTGCAGAACACAGAAAGAACGGTGGGATTGTGATTGTGGCCACTCATTTACCAATTAAGATTGAAGATGGCATGGTATTGAGGCTGCCCCCAAGATTTCCAAGGAGGCTGACTTTAGTGGATATGCTTGATCGTGCCGATATTTAA 687 0.441 MSLRKSPLPRLLLNDVSCMRNAQQILHHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANERPSRLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKNGGIVIVATHLPIKIEDGMVLRLPPRFPRRLTLVDMLDRADI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2536 228 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Mibi01g2536 228 Gene3D - 5 207 IPR027417 -
Mibi01g2536 228 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 207 IPR005895 GO:0017004|GO:0022857
Mibi01g2536 228 SMART AAA_5 35 223 IPR003593 -
Mibi01g2536 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 196 IPR027417 -
Mibi01g2536 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 7 223 IPR005895 GO:0017004|GO:0022857
Mibi01g2536 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2536 Mibi-ChrMibi01 42764011 42764697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2536 24 178 Calmodulin-binding Proteins AT2G36910 28.655 2.35e-12 64.3