Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2515 ATGTCTTCTCGCATAGTTGCAGAACCTGATACCACAGATACGACGTCGTATCTAAACTCCATCGAGCTCCACAGTTTCACCACTGATCACCACCACCCTTCTCCCACGCTTGGCCAACTCCTCAAGCACGTCGGAGACGTCCGCAAGGAAGCCACCGGAGACGGCGGCGAGACGCCCCTTCACCACACCCTCGACGTCGCCGCCGCCGGAGACGACTGCCACGTCGGACTCGGCCGTCGCTCCCTCCCCTTCGTCCTTTCCTTCACCAACCTAACTTACAACGTCAAGGCCCGCCGGAAAATTAGCCCGGCGGCCGTGTTATGTCCCCGGCGACGACGAAACCGCCTCGCCGCATCCACCGCCGCCGCCGCCGAAGGCGACGAAGAGAGCTTGTTCTCAAGAACAAAGACACTCCTCGATGATATCTCCGGCGAGGCCCGCGACGGCGAGATCATGGCGGTGATGGGCGCTAGTGGCTCCGGCAAGTCAACTCTCATCGACGCGTTGGCGAACCGTATGGCAAAAGGAAGCTTAAAAGGGAAGGTGGCTTTAAACGGCGAGGCCGTTAACTCACGGCTTCTGAAAAGCATTTCAGCTTATGTCATGCAAGACGATCTGTTATTCCCAATGCTTACCGTCCAAGAAACTCTCATGTTCGCAGCTGAATTCCGTTTGCCTCGAACTCTCTCCACATCGAAGAAGAAGATGAGAGTTCAAGCTCTGATTGATCAACTCGGCCTCCGTAACGCCGTTAACACCGTCATCGGAGACGAGAGCCACCGCGGCGTCTCCGGCGGCGAACGACGGCGCGTGTCGATCGGCATTGACATAATCCACGACCCTATTGTCCTCTTCCTTGATGAGCCAACCTCAGGATTGGACTCCACTAGCGCTTACATGGTTGTGAAGGTTCTTCAGAGAATCGCTCAAACTGGAAGCATCGTGATCATGTCAATTCACCAGCCTAGTTACAGAATCCTCGGACTCCTCGACAGGATGATCTTCCTTTCACGAGGTAAAACTGTTTACAGTGGCTCCCCTATGCAACTCCCGACATTCTTCGCGGAATTCGGGCACCCGATACCCGAAAACGAAAACCGAACCGAATTCGCTCTAGACTTGATCCGAGAGCTGGAAGGGTCCCCAGGTGGTACCAAGAGCTTGGTTGAGTTCAACAAATCATGGCAGGACAAGAAGCACAGGGAGAACAACACTACTGCAAGTCCTTCACAGAGTTCATCTCTCAAAGAAGCCATAAGTGCTAGCATTTCCAGAGGGAAGCTAGTTTCAGGCGCAACCAACACAAACACAACAACAAACACATCATCATCATCATCATCATCATGGATGGTTCCAACTTATGCCAACCCGTTTTGGATCGAACTCGCGACATTGTCGAAGCGATCCTTCACGAACTCTCGCCGTATGCCTGAGCTTTTCGCGATGCGGCTAGGCACCGTGATGGTCACAGGGTTCCTCCTCGCAACTGTGTTCTGGCATTTAGATAGTTCTCCCAAAGGTGTCCAAGAAAGACTCGGATTCTTCGCTTTTGCTATGTCTACCACTTTCTACACAACAGCTGATGCACTTCCTGTGTTCCTTCAAGAGAGACACATCTTCATGAGAGAGACTTCACACAATGCTTACCGTAGATCATCCTACCTCATCTCTCATGCCCTCGTCTCTTTCCCTCCGTTGATATTCCTCTCTTTGGCCTTCGCCGTCACGACTTTCTTTGCGGTCGGGCTTGACGGAGGATTCTCAGGTTTCGGCTTCTATTTCGCCATCATCCTCGCCTCTTTCTGGGCAGGAAACTCCTTCGTCACCTTCCTCTCTGGTTTAGTCCCACATGTGATGTTGGGATACACCATAGTGGTTGCTATTTTGGCGTACTTTCTTCTCTTTAGTGGGTTTTTTATTAACCGGGACAGGATTCCTGTGTACTGGATATGGTTTCATTATATATCTCTGGTGAAGTATCCATTCCAAGCTGTTCTTCAGAATGAGTTTGATAACCCAATGAAGTGTTTCGTGAAGGGTGTTCAGATATTTGATAACACGCCGTTGATGTCGGTGCCGGATATGATGAAGGTGAAGCTGTTGAAGAGTATGAGTGAGACGTTGGGTGTGAACATTACTAGCTCGACATGCTTGACCACTGGTTCGGACATATTGCAACAGAATAGTGTCTTGGATTTGAGCAAGTGGAATTGCTTGTGGGTCACTGTGGCTTGGGGTTTCTTCTTCAGGATTTTGTTTTACTTCATATTGTTGTTGGGAAGCAAGAACAAGAGAGCGTAA 2301 0.5085 MSSRIVAEPDTTDTTSYLNSIELHSFTTDHHHPSPTLGQLLKHVGDVRKEATGDGGETPLHHTLDVAAAGDDCHVGLGRRSLPFVLSFTNLTYNVKARRKISPAAVLCPRRRRNRLAASTAAAAEGDEESLFSRTKTLLDDISGEARDGEIMAVMGASGSGKSTLIDALANRMAKGSLKGKVALNGEAVNSRLLKSISAYVMQDDLLFPMLTVQETLMFAAEFRLPRTLSTSKKKMRVQALIDQLGLRNAVNTVIGDESHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLDRMIFLSRGKTVYSGSPMQLPTFFAEFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQDKKHRENNTTASPSQSSSLKEAISASISRGKLVSGATNTNTTTNTSSSSSSSWMVPTYANPFWIELATLSKRSFTNSRRMPELFAMRLGTVMVTGFLLATVFWHLDSSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVSFPPLIFLSLAFAVTTFFAVGLDGGFSGFGFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPVYWIWFHYISLVKYPFQAVLQNEFDNPMKCFVKGVQIFDNTPLMSVPDMMKVKLLKSMSETLGVNITSSTCLTTGSDILQQNSVLDLSKWNCLWVTVAWGFFFRILFYFILLLGSKNKRA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2515 766 MobiDBLite consensus disorder prediction 394 414 - -
Mibi01g2515 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 354 IPR027417 -
Mibi01g2515 766 Pfam ABC-2 type transporter 462 670 IPR013525 GO:0016020|GO:0140359
Mibi01g2515 766 SMART AAA_5 148 340 IPR003593 -
Mibi01g2515 766 MobiDBLite consensus disorder prediction 430 449 - -
Mibi01g2515 766 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 124 363 IPR003439 GO:0005524
Mibi01g2515 766 ProSitePatterns ABC transporters family signature. 263 277 IPR017871 GO:0005524|GO:0016887
Mibi01g2515 766 Gene3D - 130 354 IPR027417 -
Mibi01g2515 766 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 752 - -
Mibi01g2515 766 Pfam ABC transporter 139 291 IPR003439 GO:0005524
Mibi01g2515 766 Pfam ABC-2 type transporter 320 422 IPR043926 GO:0140359
Mibi01g2515 766 FunFam ABC transporter G family member 6 128 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2515 Mibi-ChrMibi01 42218605 42220905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2515 138 323 Calmodulin-binding Proteins AT2G36910 29.843 1.26e-10 63.5