Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2490 ATGGTGGGTAAGGACGATGCCCGAAAAATGTTCTGGCGGTCGGCCTCATGGTCGGCGTCTCGCTCCGCCACGCATAATCCGGACGGTGAGGATAAGGATTTCGTAGATCCAAATGGAAGTGTTGGTGGGGAAACTCGTAGGTATCCTCCTGCTCCATTAACCCCTCGATCGCAACAAAATTGTAAGGCTCGGTCGTTTTTGCCGCCGTTACAGCCGCTTTCGATTGCGCGGCGGAGCCTGGACGAGTGGCCGAAGGCGAGTTCCGACGATATCGGTGAGTGGTCTCATCCCCCAACAACTCCTAGTGGAAGAGGTAATGGAGAAAGGTTGAAACTTGATTTGTCTTCAATTCAAAGAAACCCTGATAAGAATGCTGGGCTTGTTAAGAGGGATAAGATTGCATGCTTTGATAAAGAGTGCTCAAAAGTGGCTGAACATATTTATCTTGGAGGGGATGCTGTTGCTAGGGATAGGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAATTGTGTGGGGTTTGTTTGTCCTGAGTACTTTAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGATAGTCCTTCAGAAGATATTACTAGTATTCTGTATGATGTGTTTGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTGTTTGTGCATTGTTGCCAGGGGGTATCTCGGTCCACCTCTTTGGTGATTGCTTACCTTATGTGGAGGGAAGGACAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCAGCAAGAGGTATTGCTGATCCTAATATGGGTTTTGCCTGCCAATTATTGCAATGTCAGAAAAGGGTTCATGCAGTCCCACTTAGCCCAAGCTCTTTGCTTAGAATGTATAGAATAGCCCCACACTCACCTTATGATCCACTGCATCTTGTCCCTAAAATGTTGACAAATCCTTCTCCATCAGCTCTGGATTCCAGAGGTGTGTTTATCATACATATACCTTCTGCTATATATATTTGGATTGGTAGCAATTGTGAGACCATCATGGAAAGGGATGCTAGGGGGGCTGTGTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCAATTTCATTAATAAAAGAAGGAGAAGAACCAGATTACTTTTGGGACGCCTTCTCTAAGTTTTTGCCCTTGATGGAAAAATCTGATGATAGAATAGAAAATGGAAAATCAGCCATAAATATCTTTTCAGGTGAGAGGAGAGTGGACTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTTCCTCCATTTGCTTCTGCAGAGAATGAACTTGAAACCCACCTTCCTGCTAGGGAGAGCTGTTGGAGTGTGTTAAGGCGTAAGTTTGCCTCTCCCAGTATGAAGGAATTTGTCTCAGAGCCTAAATTATCATATTCAAGGGTTTATTTGGATTCAGTGTCAGGCACTCATTCATCGGTAAAGTCATCTCCGTCACCATCACTGTCATCAACTACGTCATCTTCTTCATCCCCTTTTCTCTCACCAGATTCCATTTCTTCTGATTCAAGCAATAGTTCAAAGTGTTCTGAAACATCTCTTGATTCTCCTTATGCAGCTTTGACTTCTACGCCAGCATCCTCATCTTTATCTAACTTTTCTAACTTGTCCCTCCTTTCATCTAGTTGTTCCTCTCAACCAGCAACAAAAGATGCAGAAATTTGTAATGTCAAGTTGGCATCACAGCCCTGTCATCAGTCAGCCTCCCTGCTATTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGAGGCAGTCTATCAAAGTCTTTGAAGTTGCCACTGATGAATGATAAAACACTGGTGATGAATAGATCATCAACTTTTAATGTTGCTCGAGAAGATGGTGCTGTCATGAATGGCAACACTAGCCATTTGCTTCAATCAGATAATTTAGACAGTTCATCTGACTTAAACAACCATGTCAAGGGTGGAGGTTTGGATTTAACTCAACAGTGCGAGAGGTTATTAGGTGCTCCAGATAGTGTTGACTACAGCAAAGCTTCATTTGTTGGAAACTGTAATGACCCTTGGGTGAGAATCTCTTCAAGAGAAGATGCAAAGTCTACTTCAAACGGAATGGATGGAAGTGGTCTACTTCAATCTAATAATAGACAAAATTTAGTTTATCAATGGCCCAGTTTAGAAAAGATTGTGACATTCGGTGCAAGTCATTTGGATTCTAAAGCTGCTTTTGTTATTTTCTCTTCAAGTATAAGTTCTGGCAAACATGCAAGAAACATTTTATATCTATGGCTCGGAAGTTCTTTCAGCTGTGCTACATCTAAGGTTCGGTTAGATAGTAACACAGATATGGGTTGTCGAGGAGAAGTTGACTTGAACCAAGTTGGTTGTGATGTCCTTGCCCATTTTGGTTTGCCAAATGACACTATCATCAAGATTGTTAAAGAAAATGAAGAACCAGAAGAATTTCTTGCCTTACTGAGTACATTGTAG 2502 0.4177 MVGKDDARKMFWRSASWSASRSATHNPDGEDKDFVDPNGSVGGETRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWSHPPTTPSGRGNGERLKLDLSSIQRNPDKNAGLVKRDKIACFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPSALDSRGVFIIHIPSAIYIWIGSNCETIMERDARGAVCQIVRYEKVQGSISLIKEGEEPDYFWDAFSKFLPLMEKSDDRIENGKSAINIFSGERRVDSYNVDFEVFQKAIMGGFVPPFASAENELETHLPARESCWSVLRRKFASPSMKEFVSEPKLSYSRVYLDSVSGTHSSVKSSPSPSLSSTTSSSSSPFLSPDSISSDSSNSSKCSETSLDSPYAALTSTPASSSLSNFSNLSLLSSSCSSQPATKDAEICNVKLASQPCHQSASLLLKKPSTSLAERRGSLSKSLKLPLMNDKTLVMNRSSTFNVAREDGAVMNGNTSHLLQSDNLDSSSDLNNHVKGGGLDLTQQCERLLGAPDSVDYSKASFVGNCNDPWVRISSREDAKSTSNGMDGSGLLQSNNRQNLVYQWPSLEKIVTFGASHLDSKAAFVIFSSSISSGKHARNILYLWLGSSFSCATSKVRLDSNTDMGCRGEVDLNQVGCDVLAHFGLPNDTIIKIVKENEEPEEFLALLSTL 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2490 833 Gene3D Protein tyrosine phosphatase superfamily 120 281 IPR029021 -
Mibi01g2490 833 SUPERFAMILY Actin depolymerizing proteins 286 393 - -
Mibi01g2490 833 MobiDBLite consensus disorder prediction 486 524 - -
Mibi01g2490 833 ProSiteProfiles Dual specificity protein phosphatase domain profile. 139 281 IPR020422 GO:0006470|GO:0008138
Mibi01g2490 833 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 198 259 IPR000387 GO:0016311|GO:0016791
Mibi01g2490 833 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 132 280 IPR029021 -
Mibi01g2490 833 MobiDBLite consensus disorder prediction 13 62 - -
Mibi01g2490 833 CDD DSP 140 274 - -
Mibi01g2490 833 ProSitePatterns Tyrosine specific protein phosphatases active site. 223 233 IPR016130 GO:0016311|GO:0016791
Mibi01g2490 833 Gene3D Severin 290 386 IPR029006 -
Mibi01g2490 833 SMART dsp_5 139 278 IPR020422 GO:0006470|GO:0008138
Mibi01g2490 833 MobiDBLite consensus disorder prediction 86 109 - -
Mibi01g2490 833 Pfam Dual specificity phosphatase, catalytic domain 147 277 IPR000340 GO:0008138|GO:0016311
Mibi01g2490 833 SUPERFAMILY Actin depolymerizing proteins 730 831 - -
Mibi01g2490 833 PANTHER MKPA PROTEIN 7 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2490 Mibi-ChrMibi01 41216362 41221796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2490 1 175 Protein tyrosine phosphatase (PTP) family AT3G55270 65.591 2.91e-71 248