Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2468 ATGATATCTAGGGGCCTGTTTGGGTGGTCGCCACCGCATATACAGCCGCTTACGCCGGTGTCGGAGGTATCGGAGCCACCGGAGTCGCCGTCGCCGTATTTAGACCCTGGAGCTGAGACCTCTGCTTCGCATCAGGTTGAAGTTGAGGAGGAGATGGAGGAGCCGGAGGAGATCGAGCCGCCGCCCGCCGCCGTGCCGTTCTCCCGGCTTTTCGCTTGCGCCGACCGGCTTGATTGGACGCTGATGGTCGTCGGTTCTCTGGCCGCGGCCGCTCATGGTACGGCTCTCGTGGTTTACTTGCACTACTTTGCTAAGATCATCAATGTGTTGAGGATGGATCCTTCGCAAGGTCCGTCTGAGGAGCAATTCAACAGGTTTAAGGAGCTTGCTTTAACAATCGTTTATATTGCTGCGGGTGTTTTTGCTGCTGGCTGGATAGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATCAGGTCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGACACATACGGGAATAATGGGGATATTGTGAGCCAAGTGTTAAGTGATGTGCTGCTCATTCAATCAGCCCTTAGTGAAAAAGTCGGAAATTATATTCACAATATGGCTACATTCTTCAGTGGACTTGTTATTGGAATTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTTCTCCATAGGCTGGCAGAGAATATTCAAGATGCATATGCTGAAGCTGCAAGCATTGCTGAACAGGCGGTTTCTTATATCAGGACACTCTATGCATTTACAAATGAAACCTTGGCTAAGTATTCATATGCTACATCACTTCAAGCTACTCTTAGATATGGCATCTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGGTTTACATACGGGCTTGCAATATGCTCATGTGCTTTACAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGACAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCTTGGGTTTGAATCAGGCGGCAACAAACTTCTACTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTATGAGATGATAAGCAGGTCATCCTCATCTGTTAACCATGATGGATCTGCCCCAGATTCTGTGCAAGGGAATATAGAGTTTAGGAACGTTTATTTTAGCTATCTATCTCGCCCTGAAATCCCTATATTAAGTGGGTTTTATCTGACTGTTCCTGCTAAGAAAGCCGTGGCACTTGTCGGCAGAAATGGATCTGGAAAAAGCAGTATAATTCCACTCATGGAGCGGTTCTATGATCCCACATTAGGGGAGGTTCTTTTAGATGGTGAGAACATTAAGAATCTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTAGTTACCCAGGAGCCTGCTTTGCTCAGCCTGAGTATTAGAGACAACATTGCTTATGGTCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCCAAGATAGCCCATGCACATACATTCATCAGCTCATTAGGGAAAGGTTATGACACACAGGTTGGAAGGGCTGGCTTAGCCTTGACAGAAGAACAGAAGATAAAGCTTTCTATTGCCAGAGCTGTGCTTTTAAATCCATCTATTCTTCTGCTTGATGAGGTAACTGGTGGACTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTTTGGATCTTCTAATGTTGGGGCGTTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTATTGACCTCGGATGGCTTATATGCAGAGCTCCTTCGATGTGAAGAAGCTGCAAAACTTCCCAAGAGGATGCCAGTTCGAAACTACAAAGAGACGGCAGCTTTCCATATCGAGAAGGATTCACCCTCAAGTCATAGCTTTAAAGAACCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAGAGAGTTTCTAACGTGTTTCGGTCTACAGATGGCATGTATAGCTCACAGGAATCACCTAATGTTCGGAGCCCACCGCCGGAAAAGATGCTACAAAATGGTCAGTCTATGGATGCGACAGATAAGGAGCCTTCAATAAGAAGGCAGGACAGTTTTGAGATGAGGCTGCCAGAGTTACCAAAAATTGATGTTCAGTCTATGCATCGACAAAAATCTAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTGTTAACATCTGATCCCAAGAATGAACGCTCCCATTCACAGACTTTTAGTAGACCCCATAGTGATTCTGATGATGTTTCATTGAAACTGAGAGAAGCAAAAGGTACAAAGCATCGAAAACCTCCGTCATTTTGGAGACTTGCTAAACTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCACTTCTTGCATATGTTATTGGCCTGGTAGTGACTGCTTACTATAGGATTGATCACGTTGATCACCTCCGGCAGGAGGTAGATAAGTGGTGCTTGATTATTGCTTGCATGGGTGTTGTGACAGTTGTTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACCGAAAGAGTTAGGAGAATGATGTTTTCAGCCATGCTACGCAATGAAGTCGGTTGGTTTGATGAAGAGGAAAACAGTGCAGACAATTTATCTATGCGTTTGGCCAATGATGCCACGTTTGTACGGGCTGCTTTTAGCAACCGTCTTTCAATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTGTTCTTATTGGTGTTTTGCTGCACTGGCGATTAGCGCTTGTGGCATTAGCAACTTTTCCCGTTCTGTGTGTTTCTGCAGTTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCGTCTTTGGTTCTTGAAGATGCAGTTAGAAATATTTACACTGTTGTAGCATTTTGTGCTGGCAATAAGGTAATGGAGCTCTATAGGCTGCAGCTGAAGAAAATATTTAAGCAGAGCTTTTTGCATGGGGTGGCCATTGGTTTTGCATTTGGCTTTTCACAATTTCTACTTTTTGCTTGTAATGCACTTCTGCTTTGGTACACTGCCATATGCATAAAAAACAGTTATATGGATCCACCTACTGCGCTCAAGGAATATATGGTTTTCTCATTTGCAACATTTGCGCTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAAAGGCGTAAATCTCTCATTTCAGTGTTTGAAATTATAGACCGTGTGCCTAAAATTGACCCTGATGATAACACAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTACCCTTCTCGTCCTGAAGTTTTGGTATTGAGTAATTTCAGTCTCAAAGTCAACGGGGGACAAACAATTGCAATTGTTGGGGTTTCAGGGTCGGGAAAGAGCACTATAATATCTTTGATGGAGAGGTTTTATGATCCAGTGGCTGGTCAAGTTTTACTAGATGGGAGGGATTTAAAGCTATATAATATGAGGTGGTTGAGGAGCCACCTTGGTTTAGTTCAGCAGGAACCTATTATTTTCTCAACTACCATAAGGGAAAATATCATATATGCGAGGCATAATGCCAGTGAAGCTGAGATAAAGGAGGCCGCAAGAATAGCAAATGCTCACCATTTCATAAGCAACTTGCCCCATGGTTATGATACTCATGTTGGAATGAGAGGTGTTGATTTGACGCCTGGACAGAAACAGAGAATTGCGATAGCAAGGGTAGTGCTAAAGAATGCACCTATTTTGCTGTTGGATGAAGCTAGTTCATCAATTGAATCGGAGTCAAGCCGAGTGGTGCAAGAAGCTCTGGACACTCTTATTATGGGAAACAAGACCACCATCCTAATTGCGCATAGGGCTGCAATGATGAGGCACGTGGATAACATAGTAGTGCTCAATGGAGGACGAATAGTAGAGGAAGGAAGCCATGATTCATTGGTGGCAAAAAATGGCCTGTATGTCAGATTGATGCAACCTCACTTTGGAAAGGCATTGCGTCAGCATCGACTTGTTTAG 4209 0.4348 MISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQVEVEEEMEEPEEIEPPPAAVPFSRLFACADRLDWTLMVVGSLAAAAHGTALVVYLHYFAKIINVLRMDPSQGPSEEQFNRFKELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGIINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHDKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSSVNHDGSAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTSDGLYAELLRCEEAAKLPKRMPVRNYKETAAFHIEKDSPSSHSFKEPSSPKMMKSPSLQRVSNVFRSTDGMYSSQESPNVRSPPPEKMLQNGQSMDATDKEPSIRRQDSFEMRLPELPKIDVQSMHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSDSDDVSLKLREAKGTKHRKPPSFWRLAKLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDHVDHLRQEVDKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGVLLHWRLALVALATFPVLCVSAVAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICIKNSYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNTALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAIVGVSGSGKSTIISLMERFYDPVAGQVLLDGRDLKLYNMRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEIKEAARIANAHHFISNLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKALRQHRLV 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2468 1402 Gene3D ABC transporter type 1, transmembrane domain 771 995 IPR036640 GO:0005524|GO:0016020
Mibi01g2468 1402 Gene3D ABC transporter type 1, transmembrane domain 1054 1150 IPR036640 GO:0005524|GO:0016020
Mibi01g2468 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1142 1389 IPR027417 -
Mibi01g2468 1402 Pfam ABC transporter 1171 1319 IPR003439 GO:0005524
Mibi01g2468 1402 FunFam ABC transporter B family member 20 1143 1392 - -
Mibi01g2468 1402 FunFam ABC transporter B family member 20 69 407 - -
Mibi01g2468 1402 Gene3D ABC transporter type 1, transmembrane domain 69 659 IPR036640 GO:0005524|GO:0016020
Mibi01g2468 1402 Gene3D - 1151 1390 IPR027417 -
Mibi01g2468 1402 CDD ABC_6TM_Pgp_ABCB1_D1_like 82 381 - -
Mibi01g2468 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 640 IPR027417 -
Mibi01g2468 1402 MobiDBLite consensus disorder prediction 673 728 - -
Mibi01g2468 1402 MobiDBLite consensus disorder prediction 661 797 - -
Mibi01g2468 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 83 373 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g2468 1402 MobiDBLite consensus disorder prediction 1 63 - -
Mibi01g2468 1402 MobiDBLite consensus disorder prediction 782 797 - -
Mibi01g2468 1402 Gene3D - 396 643 IPR027417 -
Mibi01g2468 1402 FunFam ABC transporter B family member 6 1000 1150 - -
Mibi01g2468 1402 FunFam ABC transporter B family member 20 396 643 - -
Mibi01g2468 1402 FunFam ABC transporter B family member 6 770 998 - -
Mibi01g2468 1402 SUPERFAMILY ABC transporter transmembrane region 68 381 IPR036640 GO:0005524|GO:0016020
Mibi01g2468 1402 Pfam ABC transporter transmembrane region 84 356 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g2468 1402 Pfam ABC transporter transmembrane region 835 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g2468 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 641 IPR003439 GO:0005524
Mibi01g2468 1402 MobiDBLite consensus disorder prediction 729 753 - -
Mibi01g2468 1402 MobiDBLite consensus disorder prediction 754 781 - -
Mibi01g2468 1402 Pfam ABC transporter 427 571 IPR003439 GO:0005524
Mibi01g2468 1402 CDD ABC_6TM_Pgp_ABCB1_D2_like 819 1136 - -
Mibi01g2468 1402 SUPERFAMILY ABC transporter transmembrane region 816 1138 IPR036640 GO:0005524|GO:0016020
Mibi01g2468 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1153 1390 IPR003439 GO:0005524
Mibi01g2468 1402 SMART AAA_5 433 612 IPR003593 -
Mibi01g2468 1402 SMART AAA_5 1180 1367 IPR003593 -
Mibi01g2468 1402 Coils Coil 252 272 - -
Mibi01g2468 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 830 1122 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi01g2468 1402 PANTHER ABC TRANSPORTER B FAMILY 47 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2468 Mibi-ChrMibi01 40587615 40599126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2468 52 712 Calmodulin-binding Proteins AT2G36910 43.852 6.92e-169 538