Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2462 ATGAAGAGGGAAAGAGATGATCATCATGTTCTTGATCACAGCATCTCCATAGCCAATTGCTTGATGCTCCTTTCTAGTGGAGGCCAATTCAACAGGTCAATCGTCACAGCCTCATGTGAAGACGACGTTGATAGCCATAACCACCGCGTGTTCGAGTGCAAGACTTGTAACCGGCAATTCCCTTCGTTTCAAGCGTTAGGTGGCCACCGGGCGAGCCATAAGAAGCCAAGGCCAGCCGGTAACCAAGCCGATGGGATGAACGCTCTTCTTCATGATGAATCCAAGCCTAAAACTCATGAGTGTTCCATTTGTGGAATGGAGTTTGCAATAGGGCAAGCTTTGGGTGGTCACATGAGAAAGCATAGATCTGCTGCTACAACTTTGAATAATGATAGTAGTATTCACAATCACAACAAAACGACGACGTTGAGTGGAAGTAGTGATGGTAGTTGTCTTGATTCTGACCATCAGGTTAATAGTTCTTCTGGTGAAAATAAGAAAAGAGGTTTGTTTTTGGATCTAAACTTGACGCCTTTGGAGAATGATTTAGAGTTTATCAATTTTCTTTGA 570 0.4351 MKRERDDHHVLDHSISIANCLMLLSSGGQFNRSIVTASCEDDVDSHNHRVFECKTCNRQFPSFQALGGHRASHKKPRPAGNQADGMNALLHDESKPKTHECSICGMEFAIGQALGGHMRKHRSAATTLNNDSSIHNHNKTTTLSGSSDGSCLDSDHQVNSSSGENKKRGLFLDLNLTPLENDLEFINFL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2462 189 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Mibi01g2462 189 Gene3D Classic Zinc Finger 48 121 - -
Mibi01g2462 189 SMART c2h2final6 51 73 IPR013087 -
Mibi01g2462 189 SMART c2h2final6 99 121 IPR013087 -
Mibi01g2462 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Mibi01g2462 189 MobiDBLite consensus disorder prediction 127 165 - -
Mibi01g2462 189 Pfam C2H2-type zinc finger 50 76 - -
Mibi01g2462 189 Pfam C2H2-type zinc finger 99 123 - -
Mibi01g2462 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Mibi01g2462 189 PANTHER ZINC FINGER PROTEIN ZAT5 14 181 - -
Mibi01g2462 189 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Mibi01g2462 189 SUPERFAMILY beta-beta-alpha zinc fingers 49 121 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2462 Mibi-ChrMibi01 40497505 40498074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2462 1 186 C2H2 Transcription Factor Family AT2G37430 44.086 1.39e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi01g2462 zf-C2H2_6 4.7e-09 CL0361