Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2440 ATGGGTGATAGTTCAGAGCAGAAACTTGCCGTCGGAATTGATCTTGGGACCACGTACTCATGTGTTGCAGTATGGCAACATAACCAAGCCGAGATCATCGTCAATGAACAAGGCAACAGAACGACGCCATCTTATGTTGCCTTCACTGATACTCACAGGATGGTCGGTGATGCTGCCAAGAACCAGGCTGCACTTAACCCTACTGACACTATCTTTGATGCAAAGAGGTTGATTGGTAGAAGATTTAGTGATTCCCACGTTCAGAGTGATATGAAGCTTTGGCCATTTAAAATTATTTGTGGCGCCAATGATCAACCCAAAATTTCTGTAAAATTTAGATCTCAAGAAAGGCATTTTCTTCCTGAAGAAATCTCATCTATGGTATTAGCAAAGATGCGTGAGATTGCAGAGATTTATCTTGGTTCACCAGTAAAAAATGCCGTTGTGACTGTGCCAGCATATTTCAATTACAGTCAACGCCAAGCGACCAAAGATGCAGGCACAATAGCTGGCCTCAACATTATGAAAATAATCAATGAGCCTACCGCTGCGGCTATTGCATATGGTCTTCACAAGAAAGATGTGTGTCAACAGGAGAGGAACATCTTTGTGTTTGATCTTGGCGGAGGTACTTTTGATGTGTCTATTCTAACAATAAAGAAGGGCGACTTCAAAGTTAAAGCAGTCGATGGGGACACCCACCTCGGAGGAGAGGACTTTGACAATAGAATGGTGACCTTCTTTGTGGAAGAGTTCCAGAGGAAACATAAGAAGGACATTAGTGGGAGTCCAAAGGCCCTTAGGAGGTTGAGAACTGCGTGTGAGAAGGCAAAAAGAATACTCTCATCCACATCTTTTACAACCATTGATGTTGATGCTTTATTTGATGGCGTTGACTTTTATTCAACAATCTCTCGTGCCAAATTTGAGGAATTAAACCAAGACCTCTTTGCAAAGTGTTTGGAAATTGTGAAGAGTTGTCTTTTGGATTCCAAGTTGGACAAGAGCATTATTCATGAGGTTGTCCTTGTTGGTGGGTCTACGAGAATTCCTAAAGTTCAACAATTACTACAGGACTTCTTCAATGGGAAGGATCTATGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCTCTATTAAGTGGTCAAGAAATTGAAAATTTTCCAAACATTTTCTTGAGTGATGTCACCCCATTGTCCTTAGGGTTTGGGAAATATGGTGGTCTTATGAAAGTAGTTATTCCAAGGAACACTAGCATCCCTACAAAAATGTGGTTTGATAAAATGACTACAGTGATGGATTACCAAACAAGCGTCCCTATTAGTGTTTATCAGGGTGAGAGAGCAATGTCAAAAGATAATAATTTGCTGGATACATTTTACCTAACCATTACCCCAGAACCAAGGGGTGTTCCTAAATTCAAACATTGTTTTTCCATTGATGAGAATGGGATCTTAACTGTGTCTGTAGAGGAAACCAAATCGGGGAACAAAAATGAGACAAGCATACTTAATGGTAACAGAAGATTGTCAAAGGAAGAAATTGAAAGGATGGTTCAAGAAGCGGAGAAATACAAGGCTGATGATGAGAAGGACAGGAAGAAAGCTGAAGCAAAGTGTGCTTTGGACTACCATATATACAGAATCAAGACTGCTGTGAATAACAAGGTTTCTTGCTCTGTACTTTCCCCTGAAGACAGGAATAAGCTTGAGGATGCCATTAAAAGGGCCTTAGTGTGGGTTGATACCCAGCAACTTGCTGAAGTTGATGAGTATGAACATCAGAAGAGAGAGCTCGATACCATCTATAATGCCATTAGGTTGAAGATGAGTCAAGATTTGAATGATAATGTGTGTTCTTCTACATCTGTCATCGGTGCTGATTCAAGAAATAAGAAACAAAGAATGTGA 1932 0.4084 MGDSSEQKLAVGIDLGTTYSCVAVWQHNQAEIIVNEQGNRTTPSYVAFTDTHRMVGDAAKNQAALNPTDTIFDAKRLIGRRFSDSHVQSDMKLWPFKIICGANDQPKISVKFRSQERHFLPEEISSMVLAKMREIAEIYLGSPVKNAVVTVPAYFNYSQRQATKDAGTIAGLNIMKIINEPTAAAIAYGLHKKDVCQQERNIFVFDLGGGTFDVSILTIKKGDFKVKAVDGDTHLGGEDFDNRMVTFFVEEFQRKHKKDISGSPKALRRLRTACEKAKRILSSTSFTTIDVDALFDGVDFYSTISRAKFEELNQDLFAKCLEIVKSCLLDSKLDKSIIHEVVLVGGSTRIPKVQQLLQDFFNGKDLCRSINPDEAVAYGAAVQAALLSGQEIENFPNIFLSDVTPLSLGFGKYGGLMKVVIPRNTSIPTKMWFDKMTTVMDYQTSVPISVYQGERAMSKDNNLLDTFYLTITPEPRGVPKFKHCFSIDENGILTVSVEETKSGNKNETSILNGNRRLSKEEIERMVQEAEKYKADDEKDRKKAEAKCALDYHIYRIKTAVNNKVSCSVLSPEDRNKLEDAIKRALVWVDTQQLAEVDEYEHQKRELDTIYNAIRLKMSQDLNDNVCSSTSVIGADSRNKKQRM 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2440 643 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Mibi01g2440 643 FunFam Heat shock 70 kDa 236 319 - -
Mibi01g2440 643 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 620 IPR029048 -
Mibi01g2440 643 Coils Coil 515 546 - -
Mibi01g2440 643 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Mibi01g2440 643 Gene3D - 11 385 - -
Mibi01g2440 643 Gene3D - 193 367 - -
Mibi01g2440 643 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 545 IPR029047 -
Mibi01g2440 643 FunFam Heat shock 70 kDa protein 391 546 - -
Mibi01g2440 643 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 37 49 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 59 67 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 147 167 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 210 220 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 397 416 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 478 494 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 9 22 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 370 390 - -
Mibi01g2440 643 PRINTS 70kDa heat shock protein signature 338 354 - -
Mibi01g2440 643 PANTHER HEAT SHOCK PROTEIN 70KDA 10 582 IPR013126 GO:0005524|GO:0140662
Mibi01g2440 643 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Mibi01g2440 643 SUPERFAMILY Actin-like ATPase domain 197 389 IPR043129 -
Mibi01g2440 643 Gene3D - 72 127 - -
Mibi01g2440 643 FunFam Heat shock protein 70 11 203 - -
Mibi01g2440 643 Pfam Hsp70 protein 10 618 IPR013126 GO:0005524|GO:0140662
Mibi01g2440 643 Gene3D - 546 619 IPR029048 -
Mibi01g2440 643 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 550 IPR029047 -
Mibi01g2440 643 Gene3D Actin; Chain A, domain 4 237 319 - -
Mibi01g2440 643 FunFam heat shock 70 kDa protein-like 72 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2440 Mibi-ChrMibi01 39869134 39871265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2440 10 619 Calmodulin-binding Proteins AT3G12580 64.812 0.0 830