Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2438 ATGAACGGGAAGAGGATGAGTGACACTGAGAGATCGTCCCAAGTTGCCATTGGAATAGATCTTGGAACCACGTACTCATGCGTTGCAGTATGGCAACATGGTCAAGCGGAGATAATCATCAATGAACAAGGGAACAGAACGACGCCGTCTTATGTTGCTTTCACTGATACTCAAAGGATGATTGGTGATGCTGCAAAGAATCAGGCTGCACGCAACCCTGCTAACACCATCTTTGATGCAAAGAGGTTGATTGGTAGAAGATTTAGTGATTCCCAAGTTCAGAGTGATATGAAGCTTTGGCCATTCAAAATCATTTGTGGCGCCGACGATCACCCCAAAATTTCCGTACAATTTAAATCTCAAGAAAGGAACTTTCTTCCTGAAGAAATCTCATCTATGGTATTAGCAAATATGCGTGAGATTGCAGAAATGTATCTTGGTTCACCGGTAAAAAATGCAGTTGTTACTGTGCCAGCATATTTCAACTACAGTCAACGTCAAGCGACCAGAGATGCAGGCACAATTGCTGGCCTTAACATAATGAAAATAATCAATGAGCCAACTGCTGCGGCTATAACATATGGTCTTCACAAGAAAAATGTGTGTCAATTGGAGAGGAACATTTTTGTGTTTGATCTTGGAGGTGGTACCTTTGATGTGGCTGTTCTAACAATAAAGAAGGGTGACTTCAAAGTTAGAGCAGTCGATGGGGACACCCACCTCGGAGGAGAAGACTTTGACAATAGAATGGTGACCTTCTTTGTGGAAGAGTTCCAGAGGAAGCATAAGAAGGACATAAGTGGGAGTCCAAAGGCCCTTAGGAGGCTGAGAACTGCGTGTGAGAGGGCAAAAAGAACGCTCTCATCCCCTTCAATTGTTGATACAAACATTGAGGTTGATGCTTTACATGAGGGCATTGACTTTTATTCTACAATCACTCGTGCCAAGTTTGAGGAATTAAACCAAGACCTCTTTGCAAAGTGTTTGGAAATTGTACAGAATTGTCTTGGGGATTCTGAGGTGGACAAGAGTAGTATTGATGAGGTTGTCCTTGTTGGTGGGTCTACAAGAATTCCTAAAGTTCAACAACTATTACAGAAGTTATTCAATGGGAAGAAACTCTGCAACAGCGTCAACCCTGATGAGGCTGTTGCCTTAGGTGCTTCTGTTCAGGCTGCTCTATTAAGTGGTCAAGAATTTGAAAATTGTCCAAAAATTTTCTTCAGTGATGTCACCCCGTTGTCCTTAGGTTTAGGGGACCATAATGGTATCATGCGAGTAGTAATTCCAAGGAACACTTGCATTCCAACAACGATTTGGGTTGATAATAATATTAAGATGACTACTGTGGAGGATAACCAAACAGGAATCCTTTTTACTGTGTATCAAGGTGAAAGAGCCATGGCAGAGGATAACTATTTGTTGGATACGTTTGACCTAACCATTCCCCCAGAACCAAGGGGTGTTCCTAAGTGCAAATGTTGCTTTTCCATTGATGAGAATGGGATCTTAAATGTCTTTGCTGAGGAAACTAGATCGGGCAACAAAAATGAGATAGCCATACTCAATGGAAAAAGAACATTATCAAAGGAAAAAATTGAAAGGATGATTCAAGAAGCAGAAAAATACAGGGCCGATGATGAGATGCGTAGGAAGAAAGTTGAATCAAAGACTGCTTTGGAGTATTGCATATACAAAATCAAGGCTGCTATAAGTAATGAGGTGATGGGCTCAGCACTTTCCCAAATAGACAAGAAGAAGATTGAGGATGCGATTAAAAAGGCCTTAGTGTGCCTTCATGTCCAGCACCTTGCTGAAGTTGATGAATATGAGCATCAGAAGAGTGAGCTCAAAAGCATCTTCAATCCCATTAGGTTGAAAATGAGTAAAGATATGGATGACAATATGCCTCCTTCTGGAGCTCGTGTTGGCGCTGGTTCAAGTGGTAAGAAACGAAAGAGCATTGTTAGGAATTAG 1977 0.4158 MNGKRMSDTERSSQVAIGIDLGTTYSCVAVWQHGQAEIIINEQGNRTTPSYVAFTDTQRMIGDAAKNQAARNPANTIFDAKRLIGRRFSDSQVQSDMKLWPFKIICGADDHPKISVQFKSQERNFLPEEISSMVLANMREIAEMYLGSPVKNAVVTVPAYFNYSQRQATRDAGTIAGLNIMKIINEPTAAAITYGLHKKNVCQLERNIFVFDLGGGTFDVAVLTIKKGDFKVRAVDGDTHLGGEDFDNRMVTFFVEEFQRKHKKDISGSPKALRRLRTACERAKRTLSSPSIVDTNIEVDALHEGIDFYSTITRAKFEELNQDLFAKCLEIVQNCLGDSEVDKSSIDEVVLVGGSTRIPKVQQLLQKLFNGKKLCNSVNPDEAVALGASVQAALLSGQEFENCPKIFFSDVTPLSLGLGDHNGIMRVVIPRNTCIPTTIWVDNNIKMTTVEDNQTGILFTVYQGERAMAEDNYLLDTFDLTIPPEPRGVPKCKCCFSIDENGILNVFAEETRSGNKNEIAILNGKRTLSKEKIERMIQEAEKYRADDEMRRKKVESKTALEYCIYKIKAAISNEVMGSALSQIDKKKIEDAIKKALVCLHVQHLAEVDEYEHQKSELKSIFNPIRLKMSKDMDDNMPPSGARVGAGSSGKKRKSIVRN 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2438 658 FunFam Heat shock protein 70 17 205 - -
Mibi01g2438 658 Gene3D - 78 133 - -
Mibi01g2438 658 ProSitePatterns Heat shock hsp70 proteins family signature 3. 349 363 IPR018181 -
Mibi01g2438 658 Gene3D - 199 375 - -
Mibi01g2438 658 SUPERFAMILY Actin-like ATPase domain 205 397 IPR043129 -
Mibi01g2438 658 FunFam Heat shock 70 kDa 242 327 - -
Mibi01g2438 658 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 405 561 IPR029047 -
Mibi01g2438 658 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 555 631 IPR029048 -
Mibi01g2438 658 MobiDBLite consensus disorder prediction 629 658 - -
Mibi01g2438 658 Gene3D - 558 630 IPR029048 -
Mibi01g2438 658 SUPERFAMILY Actin-like ATPase domain 15 198 IPR043129 -
Mibi01g2438 658 FunFam heat shock 70 kDa protein-like 78 133 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 489 505 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 346 362 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 153 173 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 43 55 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 378 398 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 65 73 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 15 28 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 216 226 - -
Mibi01g2438 658 PRINTS 70kDa heat shock protein signature 405 424 - -
Mibi01g2438 658 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 401 557 IPR029047 -
Mibi01g2438 658 Gene3D - 17 393 - -
Mibi01g2438 658 PANTHER HEAT SHOCK PROTEIN 70KDA 16 594 IPR013126 GO:0005524|GO:0140662
Mibi01g2438 658 Pfam Hsp70 protein 16 628 IPR013126 GO:0005524|GO:0140662
Mibi01g2438 658 ProSitePatterns Heat shock hsp70 proteins family signature 1. 19 26 IPR018181 -
Mibi01g2438 658 Gene3D Actin; Chain A, domain 4 243 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2438 Mibi-ChrMibi01 39833576 39835757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2438 16 641 Calmodulin-binding Proteins AT3G12580 62.998 0.0 803