Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2436 ATGGTATTGGCAAAGATGCACGAGATTGCAGAGACGTATCTTGCTACACCAGTGAAAGATGCAGTTGTCACTGTTCCTGCTTATTTCAACTACAGTCAACGTCAAGCAACTAAAGATGCAGGCACAATTGCTGGCCTCAACATTATGAAAATAATAAATGAGCCAACTGCTGCGGCTATTGCGTATGGTCTTCACAAGAAAGATGTGTGTCAACAGGATAGGAACATCTTTGTGTTTGATCTTGGGGGAGGTACTTTTGATGTGTCTGTTCTAACAATAAGGAAGGGTGACTTCAAAGTTAGAGCAGTTGATGGGGACACACACCTCGGAGGAGAAGACTTTGACAATAGAATGGTGAACTTCTTTGTGGAAGAGTTCAAGAAGAAGCATAAGAAGGACGTCAATGGGAATTCAAAGGCCCTTAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAAAGAATACTCTCTTCACCATCTATTGTTGAAACAACCATTGAGGTTGACGCTTTATATGAGGGCATTGACTTTCATTCAACGATCACTCGTGCCAAGTTTGAGGAATTAAACCAAGATCTCTTTGCAAAGTGTTTGGAAATTGTAGAGTATTGTCTTTCGGATTCTAAGTTGGACAAGAGCAGTATTCATGAAGTTGTCCTTGTTGGCGGGTTTACTAGAATCCCTAAAGTTCAACAACTATTAAACGACTTCTTCAATGGGAAGGAACTTTGCAAGAGTATCAATCCTGATGAGGCTGTTGCTATAGGTGCTTCTATTCAAGCTGCTCTATTAAGTGGTCAAGAGATTGAAAATTTTCCTAACATTTTCTTGAGTGATGTCACCCCATTGTCCTTAGGGTTTGAGATATATGGTGGTCTCATGAAAGTAGTTATTCCAAGGAACACTAGCATTTCTACAAAAATGTGGGTTGATAAAATGACTACAGTGAAGGACAACCAAACAAGCGTCCCTATTAATGTTTATCAGGGTGAGAGAGCAATGACAAAGGATAACACTTTGCTGGATACATTTTCCCTAGCTGTTCCCTTAGAACCAAGTGGTGTTCCTAAGTTAAAATTTTCCTTTTCCATTGATGAGAATGGGATCTTAAATGTCACTGTAGAGGAAACTAGATCAGGAAACAAGAATGAGATATCCATACTTAATGGAAAAAGAAGACTATCAAAGGAACAAATTGGAAGGATGGTTCAAGAAGCGGAGGAATACAAGGCCGACGATGAGAGGTGTAGGAAGAAAGCTGAAGCAAAGAATGCTTTGGAGTATCGTGTATACAAAATCAAGGCTGCTGTAAAGAATGACTCATCAGCACTTTCCAAAACAGACAAGAAGAAGATTGAGACTGCGATTAAGAATGCTTCAATATGGGTTGATGCTGAGCAGCTTGCTGAAGTTGATGTGTATGAAAGTCAGGAGAGAAAACTTGAAAGCATCTTTAATGCCATTAAGTTGAAGATGAATCAAGATTTGAATGACAACGTGCGTCCTTCTGCATCTAGTACTGGTGCTGGTTCAAGTAATAAGAGGCAAAAAAGGGTAGTGAAGGAGGAGCCAAAACCTGAGATAATTGATCTAGACTGA 1596 0.4004 MVLAKMHEIAETYLATPVKDAVVTVPAYFNYSQRQATKDAGTIAGLNIMKIINEPTAAAIAYGLHKKDVCQQDRNIFVFDLGGGTFDVSVLTIRKGDFKVRAVDGDTHLGGEDFDNRMVNFFVEEFKKKHKKDVNGNSKALRRLRTACERAKRILSSPSIVETTIEVDALYEGIDFHSTITRAKFEELNQDLFAKCLEIVEYCLSDSKLDKSSIHEVVLVGGFTRIPKVQQLLNDFFNGKELCKSINPDEAVAIGASIQAALLSGQEIENFPNIFLSDVTPLSLGFEIYGGLMKVVIPRNTSISTKMWVDKMTTVKDNQTSVPINVYQGERAMTKDNTLLDTFSLAVPLEPSGVPKLKFSFSIDENGILNVTVEETRSGNKNEISILNGKRRLSKEQIGRMVQEAEEYKADDERCRKKAEAKNALEYRVYKIKAAVKNDSSALSKTDKKKIETAIKNASIWVDAEQLAEVDVYESQERKLESIFNAIKLKMNQDLNDNVRPSASSTGAGSSNKRQKRVVKEEPKPEIIDLD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2436 531 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 268 421 IPR029047 -
Mibi01g2436 531 FunFam Endoplasmic reticulum chaperone BiP 1 79 - -
Mibi01g2436 531 Gene3D - 2 261 - -
Mibi01g2436 531 Gene3D - 67 243 - -
Mibi01g2436 531 MobiDBLite consensus disorder prediction 494 513 - -
Mibi01g2436 531 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 270 426 IPR029047 -
Mibi01g2436 531 FunFam Heat shock 70 kDa protein 267 422 - -
Mibi01g2436 531 Pfam Hsp70 protein 1 491 IPR013126 GO:0005524|GO:0140662
Mibi01g2436 531 Gene3D - 422 493 IPR029048 -
Mibi01g2436 531 SUPERFAMILY Actin-like ATPase domain 71 265 IPR043129 -
Mibi01g2436 531 MobiDBLite consensus disorder prediction 514 531 - -
Mibi01g2436 531 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 420 494 IPR029048 -
Mibi01g2436 531 ProSitePatterns Heat shock hsp70 proteins family signature 3. 217 231 IPR018181 -
Mibi01g2436 531 PANTHER HEAT SHOCK PROTEIN 70KDA 1 457 IPR013126 GO:0005524|GO:0140662
Mibi01g2436 531 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
Mibi01g2436 531 Gene3D Actin; Chain A, domain 4 111 195 - -
Mibi01g2436 531 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Mibi01g2436 531 FunFam Heat shock 70 kDa 110 195 - -
Mibi01g2436 531 MobiDBLite consensus disorder prediction 494 531 - -
Mibi01g2436 531 PRINTS 70kDa heat shock protein signature 246 266 - -
Mibi01g2436 531 PRINTS 70kDa heat shock protein signature 354 370 - -
Mibi01g2436 531 PRINTS 70kDa heat shock protein signature 21 41 - -
Mibi01g2436 531 PRINTS 70kDa heat shock protein signature 214 230 - -
Mibi01g2436 531 PRINTS 70kDa heat shock protein signature 273 292 - -
Mibi01g2436 531 PRINTS 70kDa heat shock protein signature 84 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2436 Mibi-ChrMibi01 39791052 39792647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2436 1 493 Calmodulin-binding Proteins AT3G12580 63.710 0.0 631