Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2434 ATGGGTGATAGATTGCAGCACAAACTAGCCGTGGGAATAGATCTTGGAACCACATACTCTTGTGTTGCAGTATGGCAACATGATCGAGTAGAGATCATCGTGAATGATCAAGGGAACAGAACGACGCCGTCTTATGTTGCCTTCACTGATTCTCAAAGGATGGTTGGTGATGCTGCCAAGAACCAGGCTGCACTTAACCCTACCAACACTATCTTTGATGCCAAGAGGTTAATTGGTAGGAGATTCAATGATTCCCATGTTCAAATTGATATGAATCTTTGGCCATTTAAAGTGGTTAGTGGTGCTGAAGATAAGCCCAAAATTGTTGTAAATTTCAAATCTGAGGAAAGACATTTTCTAGCTGAAGAAATCTCATCCATGGTGTTAGCAAAGATGCGTGAGATCGCAGAGGCATATCTCGGTACAACAGTTAAGGATGCAGTTGTTACTGTGCCCGCTTATTTCAACGATTCTCAACGTCAAGCAACCAAAGATGCTGGCACAATTGCTGGACTAAATGTCATGCGAATAATCAATGAGCCCACCGCTGCAGCAATCGCGTATGGTCTTGATAAGAAAGATAGTTGTAACCGAGAGCGAAACATTTTCGTGTTTGATCTTGGTGGTGGAACCTTTGATGTGTCTCTCATCACAATTAACAAGGGTGACTTCAATGTTAAAGGAGTTGATGGTGATACACACCTTGGGGGAGAGGACTTTGACAACAGAATGGTGAAGTACTTTGTGAAAGAGTTTAAGAGGAAATATAAGAAGGACATTAGTGAGAGTGCAAAGGCCCTTAGGAGGTTGAGAACTGCGTGTGAGAGGGCAAAACGAGCACTCTCATCCACTTCAATGGTTGATACAACTATTGAGATCGATGCTTTATATGAGGGCATTGACTTTTCTTCAAAAATCACTCGTGCTAGATTTGAGGAAATGAATAAAGACCTCTTCCAAAAGTGTTTGGAAATTGCAGAGAGGTGTCTTATAGATGCTAAGATGGACAAGGAGAATATTCATGAGGGAGTTCCTAAGTTCAAAGTTTGCTTTTCCATTGATGAGAATGGTATCTTAAAAGTCTCTGCCAGGGAAACTAGGAGAGGGAATCAGAATAAGATAACCATAACCAACAGAAAAGGAAGACTATCGGAAGAAGTGATTGAAAGGATGGTTCAAGAAGCTAAGAAATACAAGGCTGATGATGAGAAGCACAAGAAAAAAGCTATAGCAAAGAATGATTTGGAGGATTACTTATACAAAATAAGGACTGGTATAAATAATGGGATGATTGGCTCAGGGCTTTCCGCTGCAGACAAGAAGTAG 1326 0.4103 MGDRLQHKLAVGIDLGTTYSCVAVWQHDRVEIIVNDQGNRTTPSYVAFTDSQRMVGDAAKNQAALNPTNTIFDAKRLIGRRFNDSHVQIDMNLWPFKVVSGAEDKPKIVVNFKSEERHFLAEEISSMVLAKMREIAEAYLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKDSCNRERNIFVFDLGGGTFDVSLITINKGDFNVKGVDGDTHLGGEDFDNRMVKYFVKEFKRKYKKDISESAKALRRLRTACERAKRALSSTSMVDTTIEIDALYEGIDFSSKITRARFEEMNKDLFQKCLEIAERCLIDAKMDKENIHEGVPKFKVCFSIDENGILKVSARETRRGNQNKITITNRKGRLSEEVIERMVQEAKKYKADDEKHKKKAIAKNDLEDYLYKIRTGINNGMIGSGLSAADKK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2434 441 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Mibi01g2434 441 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Mibi01g2434 441 Pfam Hsp70 protein 10 342 IPR013126 GO:0005524|GO:0140662
Mibi01g2434 441 Coils Coil 388 408 - -
Mibi01g2434 441 Gene3D - 72 127 - -
Mibi01g2434 441 SUPERFAMILY Actin-like ATPase domain 199 342 IPR043129 -
Mibi01g2434 441 FunFam Heat shock 70 kDa 236 321 - -
Mibi01g2434 441 FunFam heat shock 70 kDa protein-like 72 127 - -
Mibi01g2434 441 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 339 416 IPR029047 -
Mibi01g2434 441 FunFam Heat shock protein 70 11 201 - -
Mibi01g2434 441 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mibi01g2434 441 PRINTS 70kDa heat shock protein signature 147 167 - -
Mibi01g2434 441 PRINTS 70kDa heat shock protein signature 210 220 - -
Mibi01g2434 441 PRINTS 70kDa heat shock protein signature 37 49 - -
Mibi01g2434 441 PRINTS 70kDa heat shock protein signature 9 22 - -
Mibi01g2434 441 PRINTS 70kDa heat shock protein signature 59 67 - -
Mibi01g2434 441 Gene3D - 193 342 - -
Mibi01g2434 441 Gene3D - 11 192 - -
Mibi01g2434 441 Gene3D Actin; Chain A, domain 4 236 321 - -
Mibi01g2434 441 Gene3D - 384 441 IPR029048 -
Mibi01g2434 441 PANTHER HEAT SHOCK PROTEIN 70KDA 343 427 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2434 Mibi-ChrMibi01 39765311 39767354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2434 10 441 Calmodulin-binding Proteins AT5G02500 66.075 0.0 587