Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2432 ATGGGTGATAGATTGCAGCACAAACTAGCCGTGGGAATAGATCTTGGAACCACATACTCTTGTGTTGCAGTATGGCAACATGATCGAGTAGAGATCATCGTGAATGATCAAGGCAACAGAACGACGCCGTCTTATGTTGCCTTCACTGATTCTCAAAGGATGGTTGGTGATGCTGCCAAGAACCAGACTGCACTTAACCCTACCAACACTATCTTTGGTAATTATCCTTTCTCAGACCTGAGAAGCAGGAATCTCAGATCAGTGAGAAGCGTGAGAAGGAGAGGGAGAGGGAGAGTGAGAGTGATGAGAGATGAAATCTCAGATCATTTCTTTGCCATATTAAGTGGGCAAAGAAATGAAATCTTACAGAATGTTGTCCTGAGAGATGTCACCCCATTGTCCTTAGGTTTCGAACTACATAGTGGTCTCATTGAAGTAGTAATTCCAAGGAACACTAGCATTCCTACAACTATGTGGGTTGATAATATTACTACTGTTATGGATAACCAAACAATAGTCGCTTTTGATATTTTTGAGGGTGAGAGGCCAATGGCTGAGGATAACAATTTACTGGATACGTTTAATGTAATTATTCCCCCAGAAGCAAAGGGAGTTCCTACGTTCAAAGTTTGTTTTTCCATTGATGAGAATGGTATCTTAAAAGTCTCTGCCAGGGAAACTAGGACAGGGAATCAGAATAAGATAACCATAGCGAATAGAAAAGGAAGACTATCGAAAAAAGAGATTGAAAGGATGGTTCAAGAAGCTAAGAGATACAAGGCCGATGATGAGAAGCTAAAGAAGAAAGCTAAAGCAAAGAATGATTTGGAGGATTATATATACAAAATCAGGACTGGCATAAAAAATGGGATGATTGGCTCAGGGCTTTCCACTGCAGACAAGAAGAAGCTTGAGGATGCGATTGAAAGAGCCTCAGAGCTGGTTGATGACCAACAGCTTGCTGAAGTTGATGAGTATGAGAACGAGGTGAGAAAGCTCAGGAGATTATCTTTAGATTTGTGA 1023 0.4106 MGDRLQHKLAVGIDLGTTYSCVAVWQHDRVEIIVNDQGNRTTPSYVAFTDSQRMVGDAAKNQTALNPTNTIFGNYPFSDLRSRNLRSVRSVRRRGRGRVRVMRDEISDHFFAILSGQRNEILQNVVLRDVTPLSLGFELHSGLIEVVIPRNTSIPTTMWVDNITTVMDNQTIVAFDIFEGERPMAEDNNLLDTFNVIIPPEAKGVPTFKVCFSIDENGILKVSARETRTGNQNKITIANRKGRLSKKEIERMVQEAKRYKADDEKLKKKAKAKNDLEDYIYKIRTGIKNGMIGSGLSTADKKKLEDAIERASELVDDQQLAEVDEYENEVRKLRRLSLDL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2432 340 SUPERFAMILY Actin-like ATPase domain 8 84 IPR043129 -
Mibi01g2432 340 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 123 277 IPR029047 -
Mibi01g2432 340 Coils Coil 301 336 - -
Mibi01g2432 340 Gene3D - 273 337 IPR029048 -
Mibi01g2432 340 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 272 335 IPR029048 -
Mibi01g2432 340 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mibi01g2432 340 PANTHER HEAT SHOCK PROTEIN 70KDA 10 74 IPR013126 GO:0005524|GO:0140662
Mibi01g2432 340 Pfam Hsp70 protein 112 335 IPR013126 GO:0005524|GO:0140662
Mibi01g2432 340 Pfam Hsp70 protein 10 72 IPR013126 GO:0005524|GO:0140662
Mibi01g2432 340 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 119 272 IPR029047 -
Mibi01g2432 340 Coils Coil 249 269 - -
Mibi01g2432 340 Gene3D - 2 84 - -
Mibi01g2432 340 PRINTS 70kDa heat shock protein signature 37 49 - -
Mibi01g2432 340 PRINTS 70kDa heat shock protein signature 59 67 - -
Mibi01g2432 340 PRINTS 70kDa heat shock protein signature 9 22 - -
Mibi01g2432 340 FunFam Heat shock 70 kDa protein 118 273 - -
Mibi01g2432 340 FunFam heat shock 70 kDa protein-like 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2432 Mibi-ChrMibi01 39698056 39699933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2432 10 72 Calmodulin-binding Proteins AT3G12580 85.714 1.99e-33 128